Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Gm14247-201ENSMUST00000120950 237 ntBASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Gm3096-201ENSMUST00000185770 364 ntBASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Gm38266-201ENSMUST00000194931 421 ntBASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Gm8712-201ENSMUST00000221090 701 ntBASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Gm11930-201ENSMUST00000117788 190 ntBASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Gm9230-201ENSMUST00000188228 532 ntBASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc40Q8BI79 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc40Q8BI79 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc40Q8BI79 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc40Q8BI79 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc40Q8BI79 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc40Q8BI79 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.36□□□□□ -0.43
Ccdc40Q8BI79 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms