Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.34□□□□□ -0.59
SynbQ8BI41 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
SynbQ8BI41 Gm7851-201ENSMUST00000117574 323 ntBASIC11.34□□□□□ -0.59
SynbQ8BI41 Gm12196-201ENSMUST00000120954 262 ntBASIC11.34□□□□□ -0.59
SynbQ8BI41 Gm25881-201ENSMUST00000157783 103 ntBASIC11.34□□□□□ -0.59
SynbQ8BI41 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
SynbQ8BI41 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
SynbQ8BI41 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
SynbQ8BI41 Gm44958-201ENSMUST00000203734 736 ntBASIC11.34□□□□□ -0.59
SynbQ8BI41 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.34□□□□□ -0.59
SynbQ8BI41 Gm1821-202ENSMUST00000227415 750 ntBASIC11.34□□□□□ -0.59
SynbQ8BI41 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.34□□□□□ -0.59
SynbQ8BI41 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SynbQ8BI41 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.34□□□□□ -0.59
SynbQ8BI41 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SynbQ8BI41 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SynbQ8BI41 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
SynbQ8BI41 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.33□□□□□ -0.59
SynbQ8BI41 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
SynbQ8BI41 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.33□□□□□ -0.6
SynbQ8BI41 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
SynbQ8BI41 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
SynbQ8BI41 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SynbQ8BI41 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.33□□□□□ -0.6
SynbQ8BI41 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.33□□□□□ -0.6
SynbQ8BI41 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.33□□□□□ -0.6
SynbQ8BI41 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.33□□□□□ -0.6
SynbQ8BI41 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.33□□□□□ -0.6
SynbQ8BI41 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.33□□□□□ -0.6
SynbQ8BI41 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.33□□□□□ -0.6
SynbQ8BI41 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.33□□□□□ -0.6
SynbQ8BI41 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.33□□□□□ -0.6
SynbQ8BI41 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SynbQ8BI41 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
SynbQ8BI41 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
SynbQ8BI41 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
SynbQ8BI41 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.33□□□□□ -0.6
SynbQ8BI41 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SynbQ8BI41 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SynbQ8BI41 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.32□□□□□ -0.6
SynbQ8BI41 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.32□□□□□ -0.6
SynbQ8BI41 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.32□□□□□ -0.6
SynbQ8BI41 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SynbQ8BI41 Gm23596-201ENSMUST00000104304 132 ntBASIC11.32□□□□□ -0.6
SynbQ8BI41 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SynbQ8BI41 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.32□□□□□ -0.6
SynbQ8BI41 Gm23085-201ENSMUST00000157849 293 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms