Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Map1b-203ENSMUST00000223725 2669 ntBASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Gm25766-201ENSMUST00000104101 131 ntBASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Usp6nlQ80XC3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Gm25063-201ENSMUST00000104666 94 ntBASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Gm15615-201ENSMUST00000118876 198 ntBASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Gm12990-201ENSMUST00000120372 468 ntBASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Gm11244-201ENSMUST00000121243 237 ntBASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Gm9089-201ENSMUST00000122027 526 ntBASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Gm26134-201ENSMUST00000178484 110 ntBASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Gm5298-201ENSMUST00000201122 892 ntBASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Gm45120-201ENSMUST00000208880 408 ntBASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms