Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.3□□□□□ -0.6
Vrk1Q80X41 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.3□□□□□ -0.6
Vrk1Q80X41 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.3□□□□□ -0.6
Vrk1Q80X41 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.3□□□□□ -0.6
Vrk1Q80X41 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.3□□□□□ -0.6
Vrk1Q80X41 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Mir8115-201ENSMUST00000184992 119 ntBASIC11.3□□□□□ -0.6
Vrk1Q80X41 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.3□□□□□ -0.6
Vrk1Q80X41 Gm37299-201ENSMUST00000193951 826 ntBASIC11.3□□□□□ -0.6
Vrk1Q80X41 Gm9645-201ENSMUST00000197131 792 ntBASIC11.3□□□□□ -0.6
Vrk1Q80X41 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.3□□□□□ -0.6
Vrk1Q80X41 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.3□□□□□ -0.6
Vrk1Q80X41 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Gm6867-201ENSMUST00000219165 425 ntBASIC11.3□□□□□ -0.6
Vrk1Q80X41 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.3□□□□□ -0.6
Vrk1Q80X41 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.3□□□□□ -0.6
Vrk1Q80X41 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.3□□□□□ -0.6
Vrk1Q80X41 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vrk1Q80X41 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.29□□□□□ -0.6
Vrk1Q80X41 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Vrk1Q80X41 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Gm12795-201ENSMUST00000117594 539 ntBASIC11.29□□□□□ -0.6
Vrk1Q80X41 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Gm11451-201ENSMUST00000118946 630 ntBASIC11.29□□□□□ -0.6
Vrk1Q80X41 Gm12516-201ENSMUST00000120819 385 ntBASIC11.29□□□□□ -0.6
Vrk1Q80X41 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Gm16397-201ENSMUST00000122201 494 ntBASIC11.29□□□□□ -0.6
Vrk1Q80X41 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Gm6485-201ENSMUST00000160676 439 ntBASIC11.29□□□□□ -0.6
Vrk1Q80X41 Gm4654-201ENSMUST00000183305 982 ntBASIC11.29□□□□□ -0.6
Vrk1Q80X41 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Gm38210-201ENSMUST00000191944 809 ntBASIC11.29□□□□□ -0.6
Vrk1Q80X41 Gm34023-201ENSMUST00000195539 217 ntBASIC11.29□□□□□ -0.6
Vrk1Q80X41 Gm44980-201ENSMUST00000205826 314 ntBASIC11.29□□□□□ -0.6
Vrk1Q80X41 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms