Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Gm5051-201ENSMUST00000204085 485 ntBASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Gm44126-201ENSMUST00000204831 514 ntBASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Gm45575-201ENSMUST00000210283 548 ntBASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.66□□□□□ -0.54
Pcdh8Q7TSK3 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Gm2553-201ENSMUST00000215986 605 ntBASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms