Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Gm14058-201ENSMUST00000116082 735 ntBASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Gm8199-201ENSMUST00000121323 823 ntBASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf139Q7TMV1 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Gm4909-201ENSMUST00000118749 794 ntBASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Gm13461-201ENSMUST00000120980 662 ntBASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Gm23085-201ENSMUST00000157849 293 ntBASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Gm5733-201ENSMUST00000190232 939 ntBASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Gm5982-201ENSMUST00000196234 512 ntBASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Gm45113-201ENSMUST00000207518 165 ntBASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf139Q7TMV1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf139Q7TMV1 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Rnf139Q7TMV1 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Mir8093-201ENSMUST00000185043 137 ntBASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Gm19208-201ENSMUST00000213861 912 ntBASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Gm6867-201ENSMUST00000219165 425 ntBASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf139Q7TMV1 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms