Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Ddx55Q6ZPL9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Ddx55Q6ZPL9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ddx55Q6ZPL9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Gm12179-201ENSMUST00000118344 1272 ntBASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Gm14213-201ENSMUST00000119778 768 ntBASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Gm16219-201ENSMUST00000120096 274 ntBASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Gm15329-201ENSMUST00000121408 155 ntBASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Gm43671-201ENSMUST00000200422 433 ntBASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.39□□□□□ -0.27
Ddx55Q6ZPL9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Gm11578-201ENSMUST00000118530 459 ntBASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Gm13445-201ENSMUST00000121664 307 ntBASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Gm17214-201ENSMUST00000164501 541 ntBASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Gm6423-201ENSMUST00000204315 934 ntBASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms