Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Snrnp40Q6PE01 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Snrnp40Q6PE01 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Snrnp40Q6PE01 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Gm12274-201ENSMUST00000120062 385 ntBASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Gm8451-201ENSMUST00000170338 447 ntBASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Gm44647-201ENSMUST00000207402 428 ntBASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Gm45500-201ENSMUST00000211676 803 ntBASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Gm7536-201ENSMUST00000077389 444 ntBASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Gm5453-201ENSMUST00000080866 447 ntBASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Snrnp40Q6PE01 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Gm9192-201ENSMUST00000183221 985 ntBASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Gm43380-201ENSMUST00000200421 220 ntBASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Gm18968-201ENSMUST00000221319 862 ntBASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Gm10263-201ENSMUST00000085163 300 ntBASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms