Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm10012-201ENSMUST00000078252 192 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 AC121870.2-201ENSMUST00000214343 1870 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Gm15703-201ENSMUST00000120250 880 ntBASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Gm17208-201ENSMUST00000168388 535 ntBASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf220Q6PDX6 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Mir1894-201ENSMUST00000122802 81 ntBASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Rnf220Q6PDX6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms