Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Gm8756-201ENSMUST00000183250 929 ntBASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Gm4930-201ENSMUST00000219926 1087 ntBASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slx4Q6P1D7 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Gm43167-201ENSMUST00000202001 1606 ntBASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Gm20781-201ENSMUST00000193154 693 ntBASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Gm21736-201ENSMUST00000195399 693 ntBASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Gm43365-201ENSMUST00000196522 2106 ntBASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Gm43547-201ENSMUST00000197729 328 ntBASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slx4Q6P1D7 Gm15519-201ENSMUST00000120088 1566 ntBASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Gm15136-201ENSMUST00000120552 533 ntBASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Gm38314-201ENSMUST00000195709 625 ntBASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Gm43242-201ENSMUST00000199507 1776 ntBASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slx4Q6P1D7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Gm9133-201ENSMUST00000118289 540 ntBASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Gm22344-201ENSMUST00000122642 278 ntBASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Gm24943-201ENSMUST00000158329 433 ntBASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Gm7904-201ENSMUST00000217049 465 ntBASIC17.83■□□□□ 0.45
Slx4Q6P1D7 AC156790.2-201ENSMUST00000227115 568 ntBASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slx4Q6P1D7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms