Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Mir6359-201ENSMUST00000183668 81 ntBASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Gm9353-201ENSMUST00000200472 604 ntBASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 AC164429.1-201ENSMUST00000224210 518 ntBASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Gm5822-201ENSMUST00000161562 1378 ntBASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Gm27826-201ENSMUST00000175282 255 ntBASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 AC174797.2-201ENSMUST00000225835 165 ntBASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarca2Q6DIC0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 AC154354.1-203ENSMUST00000225565 1364 ntBASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Gm26313-201ENSMUST00000157770 308 ntBASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Gm38007-201ENSMUST00000192187 313 ntBASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Gm42751-201ENSMUST00000198065 559 ntBASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Gm42867-201ENSMUST00000202995 469 ntBASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Gm43463-201ENSMUST00000195967 1803 ntBASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Gm38194-201ENSMUST00000194529 2211 ntBASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarca2Q6DIC0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Gm7104-201ENSMUST00000179741 2532 ntBASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Gm15815-201ENSMUST00000120569 255 ntBASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Gm5529-201ENSMUST00000165691 891 ntBASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Gm20493-201ENSMUST00000173706 213 ntBASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Gm43244-201ENSMUST00000196994 1285 ntBASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Gm43997-201ENSMUST00000203986 1005 ntBASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Smarca2Q6DIC0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smarca2Q6DIC0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smarca2Q6DIC0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smarca2Q6DIC0 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarca2Q6DIC0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarca2Q6DIC0 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms