Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Mir7677-201ENSMUST00000184226 67 ntBASIC11.39□□□□□ -0.59
Sdc3Q64519 Gm18038-201ENSMUST00000197900 485 ntBASIC11.39□□□□□ -0.59
Sdc3Q64519 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Gm5369-201ENSMUST00000217499 588 ntBASIC11.39□□□□□ -0.59
Sdc3Q64519 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Gm807-202ENSMUST00000224929 408 ntBASIC11.39□□□□□ -0.59
Sdc3Q64519 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.39□□□□□ -0.59
Sdc3Q64519 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sdc3Q64519 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.39□□□□□ -0.59
Sdc3Q64519 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.39□□□□□ -0.59
Sdc3Q64519 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.38□□□□□ -0.59
Sdc3Q64519 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sdc3Q64519 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Gm23596-201ENSMUST00000104304 132 ntBASIC11.38□□□□□ -0.59
Sdc3Q64519 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.38□□□□□ -0.59
Sdc3Q64519 Gm14058-201ENSMUST00000116082 735 ntBASIC11.38□□□□□ -0.59
Sdc3Q64519 Gm11509-201ENSMUST00000117358 325 ntBASIC11.38□□□□□ -0.59
Sdc3Q64519 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.38□□□□□ -0.59
Sdc3Q64519 Gm25881-201ENSMUST00000157783 103 ntBASIC11.38□□□□□ -0.59
Sdc3Q64519 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.38□□□□□ -0.59
Sdc3Q64519 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Sdc3Q64519 Gm18734-201ENSMUST00000172937 808 ntBASIC11.38□□□□□ -0.59
Sdc3Q64519 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
Sdc3Q64519 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Gm37246-201ENSMUST00000192665 835 ntBASIC11.38□□□□□ -0.59
Sdc3Q64519 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Sdc3Q64519 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.38□□□□□ -0.59
Sdc3Q64519 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.38□□□□□ -0.59
Sdc3Q64519 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Gm26448-201ENSMUST00000082446 203 ntBASIC11.38□□□□□ -0.59
Sdc3Q64519 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.38□□□□□ -0.59
Sdc3Q64519 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sdc3Q64519 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.38□□□□□ -0.59
Sdc3Q64519 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sdc3Q64519 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sdc3Q64519 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sdc3Q64519 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sdc3Q64519 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sdc3Q64519 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sdc3Q64519 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sdc3Q64519 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sdc3Q64519 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sdc3Q64519 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sdc3Q64519 Gm12501-201ENSMUST00000119163 529 ntBASIC11.37□□□□□ -0.59
Sdc3Q64519 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.37□□□□□ -0.59
Sdc3Q64519 Gm14247-201ENSMUST00000120950 237 ntBASIC11.37□□□□□ -0.59
Sdc3Q64519 Gm11450-201ENSMUST00000121144 333 ntBASIC11.37□□□□□ -0.59
Sdc3Q64519 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.37□□□□□ -0.59
Sdc3Q64519 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sdc3Q64519 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.37□□□□□ -0.59
Sdc3Q64519 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.37□□□□□ -0.59
Sdc3Q64519 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.37□□□□□ -0.59
Sdc3Q64519 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.37□□□□□ -0.59
Sdc3Q64519 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sdc3Q64519 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sdc3Q64519 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.37□□□□□ -0.59
Sdc3Q64519 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.37□□□□□ -0.59
Sdc3Q64519 Gm43184-201ENSMUST00000197247 542 ntBASIC11.37□□□□□ -0.59
Sdc3Q64519 Gm44100-201ENSMUST00000204329 436 ntBASIC11.37□□□□□ -0.59
Sdc3Q64519 Gm7848-201ENSMUST00000210739 718 ntBASIC11.37□□□□□ -0.59
Sdc3Q64519 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.37□□□□□ -0.59
Sdc3Q64519 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.37□□□□□ -0.59
Sdc3Q64519 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms