Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
AtmQ62388 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
AtmQ62388 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
AtmQ62388 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
AtmQ62388 Gm4943-201ENSMUST00000132879 424 ntBASIC10.87□□□□□ -0.67
AtmQ62388 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
AtmQ62388 Gm25872-201ENSMUST00000177784 100 ntBASIC10.87□□□□□ -0.67
AtmQ62388 Capsl-202ENSMUST00000226688 739 ntBASIC10.87□□□□□ -0.67
AtmQ62388 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
AtmQ62388 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
AtmQ62388 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
AtmQ62388 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.87□□□□□ -0.67
AtmQ62388 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
AtmQ62388 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.87□□□□□ -0.67
AtmQ62388 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
AtmQ62388 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
AtmQ62388 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
AtmQ62388 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Mir6387-201ENSMUST00000184042 108 ntBASIC10.86□□□□□ -0.67
AtmQ62388 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
AtmQ62388 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Gm13608-201ENSMUST00000121807 1406 ntBASIC10.86□□□□□ -0.67
AtmQ62388 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.86□□□□□ -0.67
AtmQ62388 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
AtmQ62388 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC10.86□□□□□ -0.67
AtmQ62388 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.86□□□□□ -0.67
AtmQ62388 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.86□□□□□ -0.67
AtmQ62388 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Gm9372-201ENSMUST00000168454 430 ntBASIC10.86□□□□□ -0.67
AtmQ62388 Mir6359-201ENSMUST00000183668 81 ntBASIC10.86□□□□□ -0.67
AtmQ62388 Mir7088-201ENSMUST00000184227 86 ntBASIC10.86□□□□□ -0.67
AtmQ62388 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC10.86□□□□□ -0.67
AtmQ62388 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.86□□□□□ -0.67
AtmQ62388 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.86□□□□□ -0.67
AtmQ62388 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
AtmQ62388 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
AtmQ62388 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
AtmQ62388 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Gm16210-201ENSMUST00000122161 610 ntBASIC10.86□□□□□ -0.67
AtmQ62388 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
AtmQ62388 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
AtmQ62388 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
AtmQ62388 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
AtmQ62388 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC10.85□□□□□ -0.67
AtmQ62388 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Gm16441-201ENSMUST00000138176 924 ntBASIC10.85□□□□□ -0.67
AtmQ62388 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Gm5851-201ENSMUST00000194132 1204 ntBASIC10.85□□□□□ -0.67
AtmQ62388 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.85□□□□□ -0.67
AtmQ62388 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.85□□□□□ -0.67
AtmQ62388 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
AtmQ62388 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
AtmQ62388 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC10.85□□□□□ -0.67
AtmQ62388 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC10.85□□□□□ -0.67
AtmQ62388 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC10.85□□□□□ -0.67
AtmQ62388 Gm17221-201ENSMUST00000163909 481 ntBASIC10.85□□□□□ -0.67
AtmQ62388 Gm5529-201ENSMUST00000165691 891 ntBASIC10.85□□□□□ -0.67
AtmQ62388 Gm17073-201ENSMUST00000168069 556 ntBASIC10.85□□□□□ -0.67
AtmQ62388 Gm4705-201ENSMUST00000177415 354 ntBASIC10.85□□□□□ -0.67
AtmQ62388 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
AtmQ62388 AC121567.1-201ENSMUST00000227213 842 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms