Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Scn9aQ62205 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.64□□□□□ -0.23
Scn9aQ62205 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Scn9aQ62205 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Scn9aQ62205 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 Gm16547-201ENSMUST00000159474 293 ntBASIC13.64□□□□□ -0.23
Scn9aQ62205 Gm18010-201ENSMUST00000203553 202 ntBASIC13.64□□□□□ -0.23
Scn9aQ62205 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC13.64□□□□□ -0.23
Scn9aQ62205 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.64□□□□□ -0.23
Scn9aQ62205 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Scn9aQ62205 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.64□□□□□ -0.23
Scn9aQ62205 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.64□□□□□ -0.23
Scn9aQ62205 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 AC022682.1-201ENSMUST00000224624 2023 ntBASIC13.64□□□□□ -0.23
Scn9aQ62205 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Scn9aQ62205 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.63□□□□□ -0.23
Scn9aQ62205 Gm13284-201ENSMUST00000121020 547 ntBASIC13.63□□□□□ -0.23
Scn9aQ62205 Gm3828-201ENSMUST00000121817 257 ntBASIC13.63□□□□□ -0.23
Scn9aQ62205 Gm16305-201ENSMUST00000140747 556 ntBASIC13.63□□□□□ -0.23
Scn9aQ62205 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.63□□□□□ -0.23
Scn9aQ62205 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn9aQ62205 Gm31274-201ENSMUST00000197356 229 ntBASIC13.63□□□□□ -0.23
Scn9aQ62205 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.63□□□□□ -0.23
Scn9aQ62205 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn9aQ62205 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Scn9aQ62205 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Scn9aQ62205 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Scn9aQ62205 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Scn9aQ62205 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Scn9aQ62205 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn9aQ62205 Gm9372-201ENSMUST00000168454 430 ntBASIC13.63□□□□□ -0.23
Scn9aQ62205 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn9aQ62205 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.63□□□□□ -0.23
Scn9aQ62205 CT030166.5-201ENSMUST00000222249 420 ntBASIC13.63□□□□□ -0.23
Scn9aQ62205 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.63□□□□□ -0.23
Scn9aQ62205 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Scn9aQ62205 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn9aQ62205 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.63□□□□□ -0.23
Scn9aQ62205 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn9aQ62205 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.62□□□□□ -0.23
Scn9aQ62205 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.62□□□□□ -0.23
Scn9aQ62205 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn9aQ62205 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Scn9aQ62205 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.62□□□□□ -0.23
Scn9aQ62205 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC13.62□□□□□ -0.23
Scn9aQ62205 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scn9aQ62205 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Scn9aQ62205 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scn9aQ62205 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Scn9aQ62205 Gm7939-201ENSMUST00000201233 1050 ntBASIC13.62□□□□□ -0.23
Scn9aQ62205 BC080696-201ENSMUST00000202858 1218 ntBASIC13.62□□□□□ -0.23
Scn9aQ62205 Gm45481-201ENSMUST00000209717 877 ntBASIC13.62□□□□□ -0.23
Scn9aQ62205 Id2-203ENSMUST00000222667 958 ntBASIC13.62□□□□□ -0.23
Scn9aQ62205 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn9aQ62205 AC156790.2-201ENSMUST00000227115 568 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms