Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
VcanQ62059 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
VcanQ62059 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
VcanQ62059 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
VcanQ62059 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC10.74□□□□□ -0.69
VcanQ62059 Id2-203ENSMUST00000222667 958 ntBASIC10.74□□□□□ -0.69
VcanQ62059 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
VcanQ62059 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
VcanQ62059 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
VcanQ62059 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
VcanQ62059 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
VcanQ62059 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
VcanQ62059 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.73□□□□□ -0.69
VcanQ62059 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.73□□□□□ -0.69
VcanQ62059 Gm7928-201ENSMUST00000181249 701 ntBASIC10.73□□□□□ -0.69
VcanQ62059 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
VcanQ62059 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
VcanQ62059 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
VcanQ62059 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.73□□□□□ -0.69
VcanQ62059 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
VcanQ62059 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
VcanQ62059 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC10.73□□□□□ -0.69
VcanQ62059 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
VcanQ62059 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Gm12247-201ENSMUST00000117585 670 ntBASIC10.73□□□□□ -0.69
VcanQ62059 Gm13426-201ENSMUST00000117887 795 ntBASIC10.73□□□□□ -0.69
VcanQ62059 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.73□□□□□ -0.69
VcanQ62059 Gm43564-201ENSMUST00000196185 211 ntBASIC10.73□□□□□ -0.69
VcanQ62059 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC10.73□□□□□ -0.69
VcanQ62059 AC116797.2-202ENSMUST00000223587 1017 ntBASIC10.73□□□□□ -0.69
VcanQ62059 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.73□□□□□ -0.69
VcanQ62059 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
VcanQ62059 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
VcanQ62059 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
VcanQ62059 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC10.73□□□□□ -0.69
VcanQ62059 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.73□□□□□ -0.69
VcanQ62059 Gm24312-201ENSMUST00000178677 119 ntBASIC10.73□□□□□ -0.69
VcanQ62059 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.73□□□□□ -0.69
VcanQ62059 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC10.73□□□□□ -0.69
VcanQ62059 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.73□□□□□ -0.69
VcanQ62059 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC10.73□□□□□ -0.69
VcanQ62059 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC10.73□□□□□ -0.69
VcanQ62059 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.73□□□□□ -0.69
VcanQ62059 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
VcanQ62059 Elobl-202ENSMUST00000082339 300 ntBASIC10.73□□□□□ -0.69
VcanQ62059 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
VcanQ62059 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.72□□□□□ -0.69
VcanQ62059 Mir453-201ENSMUST00000104732 82 ntBASIC10.72□□□□□ -0.69
VcanQ62059 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
VcanQ62059 Gm21778-201ENSMUST00000178779 471 ntBASIC10.72□□□□□ -0.69
VcanQ62059 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms