Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.57□□□□□ -0.4
Shroom1Q5SX79 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Gm8737-201ENSMUST00000122208 642 ntBASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Gm5706-201ENSMUST00000181525 993 ntBASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Gm9463-201ENSMUST00000206707 601 ntBASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Gm2553-201ENSMUST00000215986 605 ntBASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Gm10752-201ENSMUST00000218348 729 ntBASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Shroom1Q5SX79 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Gm15352-201ENSMUST00000118696 270 ntBASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Gm15573-201ENSMUST00000119487 540 ntBASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Gm15610-201ENSMUST00000120584 195 ntBASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Gm29499-201ENSMUST00000189151 486 ntBASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Gm28329-201ENSMUST00000191208 689 ntBASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Gm29171-201ENSMUST00000191397 486 ntBASIC12.55□□□□□ -0.4
Shroom1Q5SX79 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Gm8365-201ENSMUST00000197334 648 ntBASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Shroom1Q5SX79 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.55□□□□□ -0.4
Shroom1Q5SX79 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms