Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fam196aQ3USH1 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fam196aQ3USH1 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fam196aQ3USH1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Fam196aQ3USH1 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fam196aQ3USH1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fam196aQ3USH1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Grk6-205ENSMUST00000224653 2976 ntBASIC11.9□□□□□ -0.5
Fam196aQ3USH1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Gm14234-201ENSMUST00000119539 845 ntBASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Gm24954-201ENSMUST00000178831 110 ntBASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Gm9162-201ENSMUST00000182081 991 ntBASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Gm43547-201ENSMUST00000197729 328 ntBASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Gm7940-201ENSMUST00000218195 769 ntBASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Gm9791-201ENSMUST00000060997 447 ntBASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fam196aQ3USH1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Fam196aQ3USH1 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm26047-201ENSMUST00000157308 113 ntBASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm25554-201ENSMUST00000158075 113 ntBASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm9625-201ENSMUST00000180422 955 ntBASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm8756-201ENSMUST00000183250 929 ntBASIC11.89□□□□□ -0.51
Fam196aQ3USH1 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm26047-202ENSMUST00000198840 115 ntBASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm45094-201ENSMUST00000207013 617 ntBASIC11.89□□□□□ -0.51
Fam196aQ3USH1 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm26670-202ENSMUST00000226862 340 ntBASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm26035-201ENSMUST00000083065 308 ntBASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.89□□□□□ -0.51
Fam196aQ3USH1 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.89□□□□□ -0.51
Fam196aQ3USH1 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fam196aQ3USH1 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.88□□□□□ -0.51
Fam196aQ3USH1 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fam196aQ3USH1 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.88□□□□□ -0.51
Fam196aQ3USH1 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fam196aQ3USH1 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fam196aQ3USH1 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Fam196aQ3USH1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fam196aQ3USH1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Fam196aQ3USH1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.88□□□□□ -0.51
Fam196aQ3USH1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms