Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Gm23251-201ENSMUST00000103773 110 ntBASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Gm11941-201ENSMUST00000119904 610 ntBASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Gm8815-201ENSMUST00000173809 620 ntBASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Gm18827-201ENSMUST00000188341 790 ntBASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Gm38314-201ENSMUST00000195709 625 ntBASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Gm9555-201ENSMUST00000200908 583 ntBASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.43□□□□□ -0.42
Nlrc4Q3UP24 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Gm12579-201ENSMUST00000118040 783 ntBASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Gm12566-201ENSMUST00000121479 359 ntBASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Gm37246-201ENSMUST00000192665 835 ntBASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Gm45113-201ENSMUST00000207518 165 ntBASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Gm7940-201ENSMUST00000218195 769 ntBASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nlrc4Q3UP24 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms