Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spg7Q3ULF4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.02□□□□□ -0.16
Spg7Q3ULF4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Spg7Q3ULF4 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spg7Q3ULF4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spg7Q3ULF4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Spg7Q3ULF4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Spg7Q3ULF4 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Spg7Q3ULF4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Spg7Q3ULF4 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Gm26013-201ENSMUST00000104404 119 ntBASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Gm25072-201ENSMUST00000175233 235 ntBASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Gm7741-201ENSMUST00000181445 989 ntBASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.02□□□□□ -0.17
Spg7Q3ULF4 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.02□□□□□ -0.17
Spg7Q3ULF4 AC164437.3-201ENSMUST00000228323 347 ntBASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg7Q3ULF4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Gm12899-201ENSMUST00000120565 551 ntBASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Mir6998-201ENSMUST00000183343 64 ntBASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Gm38210-201ENSMUST00000191944 809 ntBASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg7Q3ULF4 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg7Q3ULF4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14□□□□□ -0.17
Spg7Q3ULF4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg7Q3ULF4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg7Q3ULF4 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14□□□□□ -0.17
Spg7Q3ULF4 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg7Q3ULF4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Spg7Q3ULF4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Spg7Q3ULF4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14□□□□□ -0.17
Spg7Q3ULF4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14□□□□□ -0.17
Spg7Q3ULF4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms