Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Cog3-203ENSMUST00000227473 4197 ntBASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Gm14633-201ENSMUST00000121152 470 ntBASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Gm7928-201ENSMUST00000181249 701 ntBASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.81□□□□□ -0.68
Spg11Q3UHA3 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.81□□□□□ -0.68
Spg11Q3UHA3 AC192333.3-201ENSMUST00000224041 463 ntBASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Nsmce2-203ENSMUST00000227173 1122 ntBASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Gm8618-201ENSMUST00000097570 432 ntBASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.81□□□□□ -0.68
Spg11Q3UHA3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm17782-201ENSMUST00000174345 880 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm20781-201ENSMUST00000193154 693 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm8643-201ENSMUST00000195228 625 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm21736-201ENSMUST00000195399 693 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm5738-201ENSMUST00000206016 779 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm6859-201ENSMUST00000218614 989 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 AC153153.1-201ENSMUST00000225803 793 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm16477-201ENSMUST00000085365 801 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm17415-201ENSMUST00000096427 789 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Mir3100-201ENSMUST00000174918 65 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm44917-201ENSMUST00000208798 520 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms