Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Gm25700-201ENSMUST00000177693 110 ntBASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Gm9192-201ENSMUST00000183221 985 ntBASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.11□□□□□ -0.63
Brf2Q3UAW9 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.11□□□□□ -0.63
Brf2Q3UAW9 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Gm22133-201ENSMUST00000102082 109 ntBASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Gm26286-201ENSMUST00000104166 134 ntBASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Gm44967-201ENSMUST00000207047 631 ntBASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Gm45224-201ENSMUST00000208203 414 ntBASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Gm2553-201ENSMUST00000215986 605 ntBASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Olfr582-201ENSMUST00000098212 960 ntBASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms