Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Ntng1-201ENSMUST00000051253 327 ntBASIC11.12□□□□□ -0.63
Mmp25Q3U435 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Mmp25Q3U435 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Mmp25Q3U435 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Mmp25Q3U435 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.12□□□□□ -0.63
Mmp25Q3U435 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Gm12566-201ENSMUST00000121479 359 ntBASIC11.11□□□□□ -0.63
Mmp25Q3U435 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.11□□□□□ -0.63
Mmp25Q3U435 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.11□□□□□ -0.63
Mmp25Q3U435 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.11□□□□□ -0.63
Mmp25Q3U435 Gm1821-202ENSMUST00000227415 750 ntBASIC11.11□□□□□ -0.63
Mmp25Q3U435 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp25Q3U435 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.1□□□□□ -0.63
Mmp25Q3U435 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.1□□□□□ -0.63
Mmp25Q3U435 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.1□□□□□ -0.63
Mmp25Q3U435 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.1□□□□□ -0.63
Mmp25Q3U435 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp25Q3U435 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.1□□□□□ -0.63
Mmp25Q3U435 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms