Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Gm13316-201ENSMUST00000140537 691 ntBASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Mospd4-201ENSMUST00000180618 576 ntBASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Mir6420-201ENSMUST00000185032 102 ntBASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Gm19994-201ENSMUST00000217086 586 ntBASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Gm10254-201ENSMUST00000052888 867 ntBASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.51□□□□□ -0.41
Trim43aQ3TL54 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Gm38314-201ENSMUST00000195709 625 ntBASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Olfr284-202ENSMUST00000206647 966 ntBASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Lect2-202ENSMUST00000225183 823 ntBASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Olfr582-201ENSMUST00000098212 960 ntBASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43aQ3TL54 Rgr-203ENSMUST00000225070 4704 ntBASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.49□□□□□ -0.41
Trim43aQ3TL54 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Gm25043-201ENSMUST00000158604 212 ntBASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Gm7046-201ENSMUST00000221351 977 ntBASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms