Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Gm38001-201ENSMUST00000192900 3761 ntBASIC9.66□□□□□ -0.86
Trim63Q38HM4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Gm10531-201ENSMUST00000193527 2303 ntBASIC9.65□□□□□ -0.86
Trim63Q38HM4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC9.65□□□□□ -0.86
Trim63Q38HM4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Gm27628-201ENSMUST00000184911 107 ntBASIC9.65□□□□□ -0.86
Trim63Q38HM4 Gm4034-201ENSMUST00000187674 480 ntBASIC9.65□□□□□ -0.86
Trim63Q38HM4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Gm34391-201ENSMUST00000203706 907 ntBASIC9.65□□□□□ -0.86
Trim63Q38HM4 Gm44882-201ENSMUST00000205702 802 ntBASIC9.65□□□□□ -0.86
Trim63Q38HM4 AC161829.1-201ENSMUST00000220298 281 ntBASIC9.65□□□□□ -0.86
Trim63Q38HM4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim63Q38HM4 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim63Q38HM4 AC158779.1-201ENSMUST00000228912 3861 ntBASIC9.65□□□□□ -0.87
Trim63Q38HM4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim63Q38HM4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim63Q38HM4 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Trim63Q38HM4 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Trim63Q38HM4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Trim63Q38HM4 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim63Q38HM4 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim63Q38HM4 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.64□□□□□ -0.87
Trim63Q38HM4 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Gm24589-201ENSMUST00000116692 94 ntBASIC9.64□□□□□ -0.87
Trim63Q38HM4 Gm6447-201ENSMUST00000118905 835 ntBASIC9.64□□□□□ -0.87
Trim63Q38HM4 Gm12017-201ENSMUST00000122453 1003 ntBASIC9.64□□□□□ -0.87
Trim63Q38HM4 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Gm28033-201ENSMUST00000184224 96 ntBASIC9.64□□□□□ -0.87
Trim63Q38HM4 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.64□□□□□ -0.87
Trim63Q38HM4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 A730018C14Rik-201ENSMUST00000050754 2253 ntTSL 2 BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Trio-210ENSMUST00000227337 6375 ntBASIC9.64□□□□□ -0.87
Trim63Q38HM4 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms