Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm807-202ENSMUST00000224929 408 ntBASIC11.2□□□□□ -0.62
Nkx3-2P97503 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm5705-201ENSMUST00000066241 711 ntBASIC11.2□□□□□ -0.62
Nkx3-2P97503 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.2□□□□□ -0.62
Nkx3-2P97503 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.19□□□□□ -0.62
Nkx3-2P97503 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.19□□□□□ -0.62
Nkx3-2P97503 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Gm24891-201ENSMUST00000104391 136 ntBASIC11.19□□□□□ -0.62
Nkx3-2P97503 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Gm20426-201ENSMUST00000173657 440 ntBASIC11.19□□□□□ -0.62
Nkx3-2P97503 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Gm4034-201ENSMUST00000187674 480 ntBASIC11.19□□□□□ -0.62
Nkx3-2P97503 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx3-2P97503 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Gm5419-201ENSMUST00000119301 527 ntBASIC11.18□□□□□ -0.62
Nkx3-2P97503 Gm13408-201ENSMUST00000119822 798 ntBASIC11.18□□□□□ -0.62
Nkx3-2P97503 Gm11660-201ENSMUST00000120955 412 ntBASIC11.18□□□□□ -0.62
Nkx3-2P97503 Gm13935-201ENSMUST00000121859 798 ntBASIC11.18□□□□□ -0.62
Nkx3-2P97503 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.18□□□□□ -0.62
Nkx3-2P97503 Gm9211-201ENSMUST00000182882 975 ntBASIC11.18□□□□□ -0.62
Nkx3-2P97503 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Gm44100-201ENSMUST00000204329 436 ntBASIC11.18□□□□□ -0.62
Nkx3-2P97503 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.18□□□□□ -0.62
Nkx3-2P97503 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.18□□□□□ -0.62
Nkx3-2P97503 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.18□□□□□ -0.62
Nkx3-2P97503 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.18□□□□□ -0.62
Nkx3-2P97503 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms