Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.9□□□□□ -0.82
Npas1P97459 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Mir692-1-201ENSMUST00000102263 109 ntBASIC9.9□□□□□ -0.82
Npas1P97459 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC9.9□□□□□ -0.82
Npas1P97459 Gm13315-201ENSMUST00000120376 991 ntBASIC9.9□□□□□ -0.82
Npas1P97459 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC9.9□□□□□ -0.82
Npas1P97459 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.9□□□□□ -0.82
Npas1P97459 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.9□□□□□ -0.82
Npas1P97459 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.9□□□□□ -0.82
Npas1P97459 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC9.9□□□□□ -0.82
Npas1P97459 Gm18018-201ENSMUST00000198273 408 ntBASIC9.9□□□□□ -0.82
Npas1P97459 Igkv2-116-201ENSMUST00000199327 362 ntBASIC9.9□□□□□ -0.82
Npas1P97459 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Npas1P97459 CT030657.3-201ENSMUST00000222707 1200 ntBASIC9.9□□□□□ -0.82
Npas1P97459 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Gm6180-201ENSMUST00000065243 498 ntBASIC9.9□□□□□ -0.82
Npas1P97459 Gm10012-201ENSMUST00000078252 192 ntBASIC9.9□□□□□ -0.82
Npas1P97459 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Npas1P97459 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC9.9□□□□□ -0.82
Npas1P97459 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Npas1P97459 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.9□□□□□ -0.82
Npas1P97459 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Npas1P97459 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Npas1P97459 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Npas1P97459 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Npas1P97459 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Npas1P97459 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Npas1P97459 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.89□□□□□ -0.83
Npas1P97459 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Npas1P97459 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Npas1P97459 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.89□□□□□ -0.83
Npas1P97459 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC9.89□□□□□ -0.83
Npas1P97459 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Npas1P97459 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.89□□□□□ -0.83
Npas1P97459 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.89□□□□□ -0.83
Npas1P97459 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Gm23119-201ENSMUST00000158610 140 ntBASIC9.89□□□□□ -0.83
Npas1P97459 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Npas1P97459 Gm24196-201ENSMUST00000179161 110 ntBASIC9.89□□□□□ -0.83
Npas1P97459 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Gm8652-201ENSMUST00000181363 964 ntBASIC9.89□□□□□ -0.83
Npas1P97459 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Gm4768-201ENSMUST00000206199 686 ntBASIC9.89□□□□□ -0.83
Npas1P97459 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.89□□□□□ -0.83
Npas1P97459 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.89□□□□□ -0.83
Npas1P97459 AC069562.3-201ENSMUST00000225387 587 ntBASIC9.89□□□□□ -0.83
Npas1P97459 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Npas1P97459 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Npas1P97459 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Npas1P97459 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Npas1P97459 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Npas1P97459 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Npas1P97459 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.89□□□□□ -0.83
Npas1P97459 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Npas1P97459 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Npas1P97459 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Npas1P97459 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Npas1P97459 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.88□□□□□ -0.83
Npas1P97459 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Npas1P97459 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Npas1P97459 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms