Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm18056-201ENSMUST00000207670 568 ntBASIC12.82□□□□□ -0.36
Trim43cP86449 Gm18061-201ENSMUST00000208350 562 ntBASIC12.82□□□□□ -0.36
Trim43cP86449 Gm18063-201ENSMUST00000208529 568 ntBASIC12.82□□□□□ -0.36
Trim43cP86449 Gm18052-201ENSMUST00000208750 559 ntBASIC12.82□□□□□ -0.36
Trim43cP86449 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Trim43cP86449 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim43cP86449 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.82□□□□□ -0.36
Trim43cP86449 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43cP86449 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43cP86449 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim43cP86449 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43cP86449 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim43cP86449 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim43cP86449 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim43cP86449 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43cP86449 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim43cP86449 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43cP86449 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43cP86449 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43cP86449 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim43cP86449 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim43cP86449 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim43cP86449 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim43cP86449 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.81□□□□□ -0.36
Trim43cP86449 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.81□□□□□ -0.36
Trim43cP86449 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim43cP86449 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim43cP86449 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Gm14028-201ENSMUST00000117434 479 ntBASIC12.81□□□□□ -0.36
Trim43cP86449 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.81□□□□□ -0.36
Trim43cP86449 Gm12997-201ENSMUST00000120207 640 ntBASIC12.81□□□□□ -0.36
Trim43cP86449 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim43cP86449 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Trim43cP86449 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Gm24990-201ENSMUST00000157406 323 ntBASIC12.81□□□□□ -0.36
Trim43cP86449 Gm17040-202ENSMUST00000170597 889 ntBASIC12.81□□□□□ -0.36
Trim43cP86449 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim43cP86449 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim43cP86449 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim43cP86449 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim43cP86449 Gm5733-201ENSMUST00000190232 939 ntBASIC12.81□□□□□ -0.36
Trim43cP86449 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim43cP86449 Gm18212-201ENSMUST00000211678 889 ntBASIC12.81□□□□□ -0.36
Trim43cP86449 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Gm7940-201ENSMUST00000218195 769 ntBASIC12.81□□□□□ -0.36
Trim43cP86449 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.81□□□□□ -0.36
Trim43cP86449 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim43cP86449 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim43cP86449 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43cP86449 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim43cP86449 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.8□□□□□ -0.36
Trim43cP86449 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trim43cP86449 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trim43cP86449 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim43cP86449 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trim43cP86449 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim43cP86449 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim43cP86449 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43cP86449 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Trim43cP86449 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim43cP86449 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim43cP86449 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Trim43cP86449 Gm12196-201ENSMUST00000120954 262 ntBASIC12.8□□□□□ -0.36
Trim43cP86449 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim43cP86449 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.8□□□□□ -0.36
Trim43cP86449 Gm28686-201ENSMUST00000187404 609 ntBASIC12.8□□□□□ -0.36
Trim43cP86449 Gm5714-201ENSMUST00000197343 566 ntBASIC12.8□□□□□ -0.36
Trim43cP86449 Gm43002-201ENSMUST00000200310 155 ntBASIC12.8□□□□□ -0.36
Trim43cP86449 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim43cP86449 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.8□□□□□ -0.36
Trim43cP86449 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms