Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Gm24830-201ENSMUST00000102024 166 ntBASIC9.89□□□□□ -0.83
SgcaP82350 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SgcaP82350 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.89□□□□□ -0.83
SgcaP82350 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.89□□□□□ -0.83
SgcaP82350 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 AL593843.1-201ENSMUST00000195891 145 ntBASIC9.89□□□□□ -0.83
SgcaP82350 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.89□□□□□ -0.83
SgcaP82350 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.89□□□□□ -0.83
SgcaP82350 AC069562.3-201ENSMUST00000225387 587 ntBASIC9.89□□□□□ -0.83
SgcaP82350 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Gm26232-201ENSMUST00000083360 166 ntBASIC9.89□□□□□ -0.83
SgcaP82350 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.89□□□□□ -0.83
SgcaP82350 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SgcaP82350 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.89□□□□□ -0.83
SgcaP82350 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC9.89□□□□□ -0.83
SgcaP82350 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
SgcaP82350 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.89□□□□□ -0.83
SgcaP82350 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
SgcaP82350 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.88□□□□□ -0.83
SgcaP82350 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
SgcaP82350 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
SgcaP82350 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
SgcaP82350 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.88□□□□□ -0.83
SgcaP82350 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
SgcaP82350 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.88□□□□□ -0.83
SgcaP82350 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.88□□□□□ -0.83
SgcaP82350 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC9.88□□□□□ -0.83
SgcaP82350 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC9.88□□□□□ -0.83
SgcaP82350 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC9.88□□□□□ -0.83
SgcaP82350 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC9.88□□□□□ -0.83
SgcaP82350 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC9.88□□□□□ -0.83
SgcaP82350 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.88□□□□□ -0.83
SgcaP82350 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC9.88□□□□□ -0.83
SgcaP82350 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.88□□□□□ -0.83
SgcaP82350 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC9.88□□□□□ -0.83
SgcaP82350 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC9.88□□□□□ -0.83
SgcaP82350 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.88□□□□□ -0.83
SgcaP82350 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
SgcaP82350 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
SgcaP82350 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
SgcaP82350 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
SgcaP82350 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.88□□□□□ -0.83
SgcaP82350 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.88□□□□□ -0.83
SgcaP82350 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcaP82350 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcaP82350 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcaP82350 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.87□□□□□ -0.83
SgcaP82350 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcaP82350 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.87□□□□□ -0.83
SgcaP82350 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcaP82350 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcaP82350 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcaP82350 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcaP82350 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms