Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cxcr4P70658 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.08□□□□□ -0.64
Cxcr4P70658 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcr4P70658 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcr4P70658 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcr4P70658 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.08□□□□□ -0.64
Cxcr4P70658 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cxcr4P70658 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cxcr4P70658 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cxcr4P70658 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Cxcr4P70658 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Cxcr4P70658 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.07□□□□□ -0.64
Cxcr4P70658 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cxcr4P70658 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.07□□□□□ -0.64
Cxcr4P70658 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Gm14247-201ENSMUST00000120950 237 ntBASIC11.07□□□□□ -0.64
Cxcr4P70658 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.07□□□□□ -0.64
Cxcr4P70658 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.07□□□□□ -0.64
Cxcr4P70658 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Cxcr4P70658 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.07□□□□□ -0.64
Cxcr4P70658 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cxcr4P70658 Rprl1-202ENSMUST00000198476 238 ntBASIC11.07□□□□□ -0.64
Cxcr4P70658 Gm18711-201ENSMUST00000199341 750 ntBASIC11.07□□□□□ -0.64
Cxcr4P70658 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.07□□□□□ -0.64
Cxcr4P70658 Gm18212-201ENSMUST00000211678 889 ntBASIC11.07□□□□□ -0.64
Cxcr4P70658 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.07□□□□□ -0.64
Cxcr4P70658 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.07□□□□□ -0.64
Cxcr4P70658 Gzmn-202ENSMUST00000225535 989 ntBASIC11.07□□□□□ -0.64
Cxcr4P70658 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Cxcr4P70658 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.07□□□□□ -0.64
Cxcr4P70658 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.07□□□□□ -0.64
Cxcr4P70658 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cxcr4P70658 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cxcr4P70658 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr4P70658 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.06□□□□□ -0.64
Cxcr4P70658 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.06□□□□□ -0.64
Cxcr4P70658 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
Cxcr4P70658 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.06□□□□□ -0.64
Cxcr4P70658 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.06□□□□□ -0.64
Cxcr4P70658 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cxcr4P70658 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Cxcr4P70658 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm12015-201ENSMUST00000117065 843 ntBASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm13296-201ENSMUST00000117854 997 ntBASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm14017-201ENSMUST00000121934 386 ntBASIC11.06□□□□□ -0.64
Cxcr4P70658 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm6963-201ENSMUST00000147879 379 ntBASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.06□□□□□ -0.64
Cxcr4P70658 Rprl1-201ENSMUST00000158050 327 ntBASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm25700-201ENSMUST00000177693 110 ntBASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.06□□□□□ -0.64
Cxcr4P70658 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr4P70658 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.06□□□□□ -0.64
Cxcr4P70658 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.06□□□□□ -0.64
Cxcr4P70658 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.06□□□□□ -0.64
Cxcr4P70658 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms