Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Msx3P70354 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Msx3P70354 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Msx3P70354 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.11□□□□□ -0.47
Msx3P70354 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.11□□□□□ -0.47
Msx3P70354 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.11□□□□□ -0.47
Msx3P70354 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Msx3P70354 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Msx3P70354 Gm27627-201ENSMUST00000183644 150 ntBASIC12.11□□□□□ -0.47
Msx3P70354 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.11□□□□□ -0.47
Msx3P70354 Gm43184-201ENSMUST00000197247 542 ntBASIC12.11□□□□□ -0.47
Msx3P70354 AY036118-201ENSMUST00000200021 923 ntBASIC12.11□□□□□ -0.47
Msx3P70354 Rps4l-202ENSMUST00000204242 789 ntBASIC12.11□□□□□ -0.47
Msx3P70354 Gm17812-201ENSMUST00000204935 318 ntBASIC12.11□□□□□ -0.47
Msx3P70354 Gm45224-201ENSMUST00000208203 414 ntBASIC12.11□□□□□ -0.47
Msx3P70354 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Msx3P70354 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Msx3P70354 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Msx3P70354 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.11□□□□□ -0.47
Msx3P70354 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.11□□□□□ -0.47
Msx3P70354 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Msx3P70354 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.11□□□□□ -0.47
Msx3P70354 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Msx3P70354 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Msx3P70354 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.1□□□□□ -0.47
Msx3P70354 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.1□□□□□ -0.47
Msx3P70354 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Msx3P70354 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Mir1938-201ENSMUST00000158746 100 ntBASIC12.1□□□□□ -0.47
Msx3P70354 Gm26361-201ENSMUST00000158868 186 ntBASIC12.1□□□□□ -0.47
Msx3P70354 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.1□□□□□ -0.47
Msx3P70354 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.1□□□□□ -0.47
Msx3P70354 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.1□□□□□ -0.47
Msx3P70354 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.1□□□□□ -0.47
Msx3P70354 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.1□□□□□ -0.47
Msx3P70354 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.1□□□□□ -0.47
Msx3P70354 Gm44967-201ENSMUST00000207047 631 ntBASIC12.1□□□□□ -0.47
Msx3P70354 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Gm45331-201ENSMUST00000209868 554 ntBASIC12.1□□□□□ -0.47
Msx3P70354 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.1□□□□□ -0.47
Msx3P70354 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.1□□□□□ -0.47
Msx3P70354 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.1□□□□□ -0.47
Msx3P70354 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.1□□□□□ -0.47
Msx3P70354 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.1□□□□□ -0.47
Msx3P70354 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.1□□□□□ -0.47
Msx3P70354 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msx3P70354 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.1□□□□□ -0.47
Msx3P70354 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Msx3P70354 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Msx3P70354 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.1□□□□□ -0.47
Msx3P70354 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Msx3P70354 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Msx3P70354 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.09□□□□□ -0.47
Msx3P70354 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Msx3P70354 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Msx3P70354 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx3P70354 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Msx3P70354 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.09□□□□□ -0.47
Msx3P70354 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Msx3P70354 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Msx3P70354 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Msx3P70354 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms