Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Gm11509-201ENSMUST00000117358 325 ntBASIC11.05□□□□□ -0.64
Six5P70178 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.05□□□□□ -0.64
Six5P70178 Gm15808-201ENSMUST00000119046 604 ntBASIC11.05□□□□□ -0.64
Six5P70178 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.05□□□□□ -0.64
Six5P70178 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.05□□□□□ -0.64
Six5P70178 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Six5P70178 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Six5P70178 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.05□□□□□ -0.64
Six5P70178 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.05□□□□□ -0.64
Six5P70178 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Six5P70178 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Six5P70178 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.04□□□□□ -0.64
Six5P70178 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Six5P70178 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Six5P70178 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Six5P70178 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Six5P70178 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Six5P70178 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.04□□□□□ -0.64
Six5P70178 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Gm15711-201ENSMUST00000118889 535 ntBASIC11.04□□□□□ -0.64
Six5P70178 Gm11700-201ENSMUST00000119409 403 ntBASIC11.04□□□□□ -0.64
Six5P70178 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.04□□□□□ -0.64
Six5P70178 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.04□□□□□ -0.64
Six5P70178 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.04□□□□□ -0.64
Six5P70178 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.04□□□□□ -0.64
Six5P70178 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.04□□□□□ -0.64
Six5P70178 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Six5P70178 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Gm38117-201ENSMUST00000194653 939 ntBASIC11.04□□□□□ -0.64
Six5P70178 Gm6450-201ENSMUST00000200896 574 ntBASIC11.04□□□□□ -0.64
Six5P70178 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.04□□□□□ -0.64
Six5P70178 Gm9797-202ENSMUST00000218003 294 ntBASIC11.04□□□□□ -0.64
Six5P70178 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.04□□□□□ -0.64
Six5P70178 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.04□□□□□ -0.64
Six5P70178 Gm807-202ENSMUST00000224929 408 ntBASIC11.04□□□□□ -0.64
Six5P70178 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Six5P70178 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.04□□□□□ -0.64
Six5P70178 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Six5P70178 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.04□□□□□ -0.64
Six5P70178 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Six5P70178 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Six5P70178 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Six5P70178 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Six5P70178 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Six5P70178 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.03□□□□□ -0.64
Six5P70178 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Six5P70178 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Six5P70178 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Six5P70178 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Six5P70178 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.03□□□□□ -0.64
Six5P70178 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.03□□□□□ -0.64
Six5P70178 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Six5P70178 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms