Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC9.91□□□□□ -0.82
Gabra1P62812 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.91□□□□□ -0.82
Gabra1P62812 Gm8810-201ENSMUST00000172895 754 ntBASIC9.91□□□□□ -0.82
Gabra1P62812 Gm8018-201ENSMUST00000173536 789 ntBASIC9.91□□□□□ -0.82
Gabra1P62812 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Gabra1P62812 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.91□□□□□ -0.82
Gabra1P62812 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC9.91□□□□□ -0.82
Gabra1P62812 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Gm15823-201ENSMUST00000064305 670 ntBASIC9.91□□□□□ -0.82
Gabra1P62812 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
Gabra1P62812 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Gabra1P62812 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.91□□□□□ -0.82
Gabra1P62812 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.91□□□□□ -0.82
Gabra1P62812 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gabra1P62812 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Gabra1P62812 Gm7789-202ENSMUST00000211273 1400 ntBASIC9.9□□□□□ -0.82
Gabra1P62812 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.9□□□□□ -0.82
Gabra1P62812 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Gabra1P62812 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Gabra1P62812 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.9□□□□□ -0.82
Gabra1P62812 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.9□□□□□ -0.82
Gabra1P62812 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Gabra1P62812 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Gabra1P62812 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Gm12314-201ENSMUST00000118104 538 ntBASIC9.9□□□□□ -0.82
Gabra1P62812 Gm12203-201ENSMUST00000118235 598 ntBASIC9.9□□□□□ -0.82
Gabra1P62812 Gm12209-201ENSMUST00000120089 596 ntBASIC9.9□□□□□ -0.82
Gabra1P62812 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC9.9□□□□□ -0.82
Gabra1P62812 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Gabra1P62812 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.9□□□□□ -0.82
Gabra1P62812 Gm9136-201ENSMUST00000193368 454 ntBASIC9.9□□□□□ -0.82
Gabra1P62812 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC9.9□□□□□ -0.82
Gabra1P62812 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.9□□□□□ -0.82
Gabra1P62812 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.9□□□□□ -0.82
Gabra1P62812 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Gm5626-201ENSMUST00000222151 1058 ntBASIC9.9□□□□□ -0.82
Gabra1P62812 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Gabra1P62812 AC069562.3-201ENSMUST00000225387 587 ntBASIC9.9□□□□□ -0.82
Gabra1P62812 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.9□□□□□ -0.82
Gabra1P62812 CT025535.1-201ENSMUST00000227172 491 ntBASIC9.9□□□□□ -0.82
Gabra1P62812 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
Gabra1P62812 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Gabra1P62812 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gabra1P62812 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
Gabra1P62812 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Gabra1P62812 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Gabra1P62812 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Gabra1P62812 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Gabra1P62812 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Gabra1P62812 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Gabra1P62812 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Gabra1P62812 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Gabra1P62812 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Gabra1P62812 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Gabra1P62812 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms