Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm27331-201ENSMUST00000183705 60 ntBASIC10.69□□□□□ -0.7
Lsm3P62311 Gm27838-201ENSMUST00000184829 128 ntBASIC10.69□□□□□ -0.7
Lsm3P62311 Gm44958-201ENSMUST00000203734 736 ntBASIC10.69□□□□□ -0.7
Lsm3P62311 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Lsm3P62311 Gm32025-201ENSMUST00000217960 307 ntBASIC10.69□□□□□ -0.7
Lsm3P62311 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.69□□□□□ -0.7
Lsm3P62311 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Gm10254-201ENSMUST00000052888 867 ntBASIC10.69□□□□□ -0.7
Lsm3P62311 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Lsm3P62311 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Lsm3P62311 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Lsm3P62311 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Lsm3P62311 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.68□□□□□ -0.7
Lsm3P62311 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Lsm3P62311 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Lsm3P62311 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Lsm3P62311 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Lsm3P62311 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Gm22189-201ENSMUST00000103822 86 ntBASIC10.68□□□□□ -0.7
Lsm3P62311 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.68□□□□□ -0.7
Lsm3P62311 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.68□□□□□ -0.7
Lsm3P62311 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.68□□□□□ -0.7
Lsm3P62311 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.68□□□□□ -0.7
Lsm3P62311 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.68□□□□□ -0.7
Lsm3P62311 Gm807-202ENSMUST00000224929 408 ntBASIC10.68□□□□□ -0.7
Lsm3P62311 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Lsm3P62311 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Lsm3P62311 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Lsm3P62311 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm3P62311 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.68□□□□□ -0.7
Lsm3P62311 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Lsm3P62311 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Lsm3P62311 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Lsm3P62311 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.67□□□□□ -0.7
Lsm3P62311 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.67□□□□□ -0.7
Lsm3P62311 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.67□□□□□ -0.7
Lsm3P62311 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.67□□□□□ -0.7
Lsm3P62311 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Lsm3P62311 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.67□□□□□ -0.7
Lsm3P62311 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.67□□□□□ -0.7
Lsm3P62311 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.67□□□□□ -0.7
Lsm3P62311 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.67□□□□□ -0.7
Lsm3P62311 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.67□□□□□ -0.7
Lsm3P62311 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.67□□□□□ -0.7
Lsm3P62311 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms