Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nphp4P59240 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nphp4P59240 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nphp4P59240 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Nphp4P59240 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nphp4P59240 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nphp4P59240 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nphp4P59240 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nphp4P59240 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Nphp4P59240 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nphp4P59240 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Nphp4P59240 Gm13284-201ENSMUST00000121020 547 ntBASIC15.82■□□□□ 0.12
Nphp4P59240 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC15.82■□□□□ 0.12
Nphp4P59240 Gm23218-201ENSMUST00000158124 276 ntBASIC15.82■□□□□ 0.12
Nphp4P59240 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC15.82■□□□□ 0.12
Nphp4P59240 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC15.82■□□□□ 0.12
Nphp4P59240 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC15.82■□□□□ 0.12
Nphp4P59240 Gm18776-201ENSMUST00000188833 654 ntBASIC15.82■□□□□ 0.12
Nphp4P59240 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nphp4P59240 Gm9116-201ENSMUST00000192400 1018 ntBASIC15.82■□□□□ 0.12
Nphp4P59240 Gm5740-201ENSMUST00000211003 1857 ntBASIC15.82■□□□□ 0.12
Nphp4P59240 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nphp4P59240 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nphp4P59240 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nphp4P59240 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nphp4P59240 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nphp4P59240 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nphp4P59240 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nphp4P59240 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nphp4P59240 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nphp4P59240 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Nphp4P59240 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nphp4P59240 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nphp4P59240 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nphp4P59240 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Nphp4P59240 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nphp4P59240 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nphp4P59240 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC15.81■□□□□ 0.12
Nphp4P59240 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nphp4P59240 Gm15617-201ENSMUST00000118973 771 ntBASIC15.81■□□□□ 0.12
Nphp4P59240 Gm9673-201ENSMUST00000119287 781 ntBASIC15.81■□□□□ 0.12
Nphp4P59240 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC15.81■□□□□ 0.12
Nphp4P59240 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC15.81■□□□□ 0.12
Nphp4P59240 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC15.81■□□□□ 0.12
Nphp4P59240 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC15.81■□□□□ 0.12
Nphp4P59240 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Nphp4P59240 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC15.81■□□□□ 0.12
Nphp4P59240 Mt1-202ENSMUST00000211807 1085 ntBASIC15.81■□□□□ 0.12
Nphp4P59240 Ap3s1-202ENSMUST00000224622 978 ntBASIC15.81■□□□□ 0.12
Nphp4P59240 AC159002.1-201ENSMUST00000226714 924 ntBASIC15.81■□□□□ 0.12
Nphp4P59240 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nphp4P59240 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Nphp4P59240 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nphp4P59240 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nphp4P59240 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC15.81■□□□□ 0.12
Nphp4P59240 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.81■□□□□ 0.12
Nphp4P59240 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.81■□□□□ 0.12
Nphp4P59240 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nphp4P59240 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nphp4P59240 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nphp4P59240 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nphp4P59240 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nphp4P59240 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nphp4P59240 Nudt13-207ENSMUST00000224311 1574 ntBASIC15.8■□□□□ 0.12
Nphp4P59240 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nphp4P59240 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nphp4P59240 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nphp4P59240 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nphp4P59240 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nphp4P59240 Gm12194-201ENSMUST00000117756 1012 ntBASIC15.8■□□□□ 0.12
Nphp4P59240 Gm8302-201ENSMUST00000119217 852 ntBASIC15.8■□□□□ 0.12
Nphp4P59240 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nphp4P59240 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nphp4P59240 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC15.8■□□□□ 0.12
Nphp4P59240 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Nphp4P59240 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Nphp4P59240 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nphp4P59240 Gm44573-201ENSMUST00000191753 2370 ntBASIC15.8■□□□□ 0.12
Nphp4P59240 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nphp4P59240 Gm45416-201ENSMUST00000209713 2201 ntBASIC15.8■□□□□ 0.12
Nphp4P59240 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nphp4P59240 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Nphp4P59240 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nphp4P59240 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nphp4P59240 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nphp4P59240 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nphp4P59240 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Nphp4P59240 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nphp4P59240 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Nphp4P59240 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Nphp4P59240 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nphp4P59240 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nphp4P59240 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nphp4P59240 Gm25053-201ENSMUST00000103982 133 ntBASIC15.79■□□□□ 0.12
Nphp4P59240 Gm25922-201ENSMUST00000104281 130 ntBASIC15.79■□□□□ 0.12
Nphp4P59240 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nphp4P59240 Gm6322-201ENSMUST00000118789 1004 ntBASIC15.79■□□□□ 0.12
Nphp4P59240 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC15.79■□□□□ 0.12
Nphp4P59240 Gm24679-201ENSMUST00000158762 111 ntBASIC15.79■□□□□ 0.12
Nphp4P59240 Gm17192-201ENSMUST00000169031 511 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms