Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 Gm17812-201ENSMUST00000204935 318 ntBASIC10.56□□□□□ -0.72
Abcd3P55096 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Abcd3P55096 Gm17827-201ENSMUST00000211825 742 ntBASIC10.56□□□□□ -0.72
Abcd3P55096 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Abcd3P55096 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.56□□□□□ -0.72
Abcd3P55096 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Abcd3P55096 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.56□□□□□ -0.72
Abcd3P55096 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.56□□□□□ -0.72
Abcd3P55096 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.56□□□□□ -0.72
Abcd3P55096 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Abcd3P55096 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.55□□□□□ -0.72
Abcd3P55096 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
Abcd3P55096 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Abcd3P55096 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Abcd3P55096 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Abcd3P55096 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.55□□□□□ -0.72
Abcd3P55096 Gm26361-201ENSMUST00000158868 186 ntBASIC10.55□□□□□ -0.72
Abcd3P55096 Gm17376-201ENSMUST00000166016 84 ntBASIC10.55□□□□□ -0.72
Abcd3P55096 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 Gm25890-201ENSMUST00000177643 165 ntBASIC10.55□□□□□ -0.72
Abcd3P55096 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.55□□□□□ -0.72
Abcd3P55096 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.55□□□□□ -0.72
Abcd3P55096 Gm22614-201ENSMUST00000178300 165 ntBASIC10.55□□□□□ -0.72
Abcd3P55096 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.55□□□□□ -0.72
Abcd3P55096 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Abcd3P55096 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 Gm22042-201ENSMUST00000082989 165 ntBASIC10.55□□□□□ -0.72
Abcd3P55096 Gm26110-201ENSMUST00000083971 165 ntBASIC10.55□□□□□ -0.72
Abcd3P55096 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.55□□□□□ -0.72
Abcd3P55096 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.55□□□□□ -0.72
Abcd3P55096 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Abcd3P55096 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.55□□□□□ -0.72
Abcd3P55096 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Abcd3P55096 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Abcd3P55096 Gm13615-201ENSMUST00000120242 1612 ntBASIC10.55□□□□□ -0.72
Abcd3P55096 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.55□□□□□ -0.72
Abcd3P55096 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Abcd3P55096 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Abcd3P55096 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.54□□□□□ -0.72
Abcd3P55096 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Abcd3P55096 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Abcd3P55096 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Abcd3P55096 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Abcd3P55096 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Abcd3P55096 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Abcd3P55096 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.54□□□□□ -0.72
Abcd3P55096 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Abcd3P55096 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Abcd3P55096 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Abcd3P55096 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Abcd3P55096 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.54□□□□□ -0.72
Abcd3P55096 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Abcd3P55096 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Abcd3P55096 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Abcd3P55096 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Abcd3P55096 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.54□□□□□ -0.72
Abcd3P55096 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Abcd3P55096 Gm15236-201ENSMUST00000117309 379 ntBASIC10.54□□□□□ -0.72
Abcd3P55096 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.54□□□□□ -0.72
Abcd3P55096 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.54□□□□□ -0.72
Abcd3P55096 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Abcd3P55096 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Abcd3P55096 Gm27627-201ENSMUST00000183644 150 ntBASIC10.54□□□□□ -0.72
Abcd3P55096 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.54□□□□□ -0.72
Abcd3P55096 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.54□□□□□ -0.72
Abcd3P55096 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Abcd3P55096 AY036118-201ENSMUST00000200021 923 ntBASIC10.54□□□□□ -0.72
Abcd3P55096 Gm43002-201ENSMUST00000200310 155 ntBASIC10.54□□□□□ -0.72
Abcd3P55096 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.54□□□□□ -0.72
Abcd3P55096 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms