Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm16380-201ENSMUST00000077997 478 ntBASIC14.89□□□□□ -0.03
Msh6P54276 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Msh6P54276 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
Msh6P54276 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Msh6P54276 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.89□□□□□ -0.03
Msh6P54276 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Msh6P54276 Gm11244-201ENSMUST00000121243 237 ntBASIC14.88□□□□□ -0.03
Msh6P54276 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.88□□□□□ -0.03
Msh6P54276 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Msh6P54276 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.88□□□□□ -0.03
Msh6P54276 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.88□□□□□ -0.03
Msh6P54276 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC14.88□□□□□ -0.03
Msh6P54276 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Msh6P54276 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.88□□□□□ -0.03
Msh6P54276 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Msh6P54276 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.88□□□□□ -0.03
Msh6P54276 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Msh6P54276 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh6P54276 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC14.88□□□□□ -0.03
Msh6P54276 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Msh6P54276 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 Gm15374-201ENSMUST00000119313 844 ntBASIC14.87□□□□□ -0.03
Msh6P54276 Gm12783-201ENSMUST00000121425 397 ntBASIC14.87□□□□□ -0.03
Msh6P54276 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 Gm8723-201ENSMUST00000166076 820 ntBASIC14.87□□□□□ -0.03
Msh6P54276 Gm8701-201ENSMUST00000169259 874 ntBASIC14.87□□□□□ -0.03
Msh6P54276 Gm20495-201ENSMUST00000173902 235 ntBASIC14.87□□□□□ -0.03
Msh6P54276 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Msh6P54276 Gm7902-201ENSMUST00000198842 947 ntBASIC14.87□□□□□ -0.03
Msh6P54276 AC114645.1-201ENSMUST00000215831 187 ntBASIC14.87□□□□□ -0.03
Msh6P54276 Gm23105-201ENSMUST00000083719 134 ntBASIC14.87□□□□□ -0.03
Msh6P54276 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Msh6P54276 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.87□□□□□ -0.03
Msh6P54276 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.87□□□□□ -0.03
Msh6P54276 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.87□□□□□ -0.03
Msh6P54276 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msh6P54276 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Msh6P54276 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC14.86□□□□□ -0.03
Msh6P54276 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Msh6P54276 Gm9135-201ENSMUST00000182963 990 ntBASIC14.86□□□□□ -0.03
Msh6P54276 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC14.86□□□□□ -0.03
Msh6P54276 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC14.86□□□□□ -0.03
Msh6P54276 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC14.86□□□□□ -0.03
Msh6P54276 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.86□□□□□ -0.03
Msh6P54276 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msh6P54276 Gm4978-201ENSMUST00000071565 801 ntBASIC14.86□□□□□ -0.03
Msh6P54276 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msh6P54276 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msh6P54276 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msh6P54276 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msh6P54276 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msh6P54276 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
Msh6P54276 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms