Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Gm12217-201ENSMUST00000118858 696 ntBASIC11.66□□□□□ -0.54
Pdx1P52946 Gm12196-201ENSMUST00000120954 262 ntBASIC11.66□□□□□ -0.54
Pdx1P52946 Gm11960-201ENSMUST00000122068 925 ntBASIC11.66□□□□□ -0.54
Pdx1P52946 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.66□□□□□ -0.54
Pdx1P52946 Gm17040-202ENSMUST00000170597 889 ntBASIC11.66□□□□□ -0.54
Pdx1P52946 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.66□□□□□ -0.54
Pdx1P52946 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Pdx1P52946 Gm16505-201ENSMUST00000179981 232 ntBASIC11.66□□□□□ -0.54
Pdx1P52946 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.66□□□□□ -0.54
Pdx1P52946 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.66□□□□□ -0.54
Pdx1P52946 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.66□□□□□ -0.54
Pdx1P52946 Gm2553-201ENSMUST00000215986 605 ntBASIC11.66□□□□□ -0.54
Pdx1P52946 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.66□□□□□ -0.54
Pdx1P52946 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Pdx1P52946 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pdx1P52946 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.66□□□□□ -0.54
Pdx1P52946 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pdx1P52946 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.66□□□□□ -0.54
Pdx1P52946 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pdx1P52946 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.66□□□□□ -0.54
Pdx1P52946 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdx1P52946 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pdx1P52946 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdx1P52946 Paupar-201ENSMUST00000194826 3482 ntBASIC11.65□□□□□ -0.54
Pdx1P52946 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdx1P52946 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdx1P52946 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdx1P52946 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.65□□□□□ -0.54
Pdx1P52946 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Pdx1P52946 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdx1P52946 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdx1P52946 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pdx1P52946 Gm7857-201ENSMUST00000117957 358 ntBASIC11.65□□□□□ -0.54
Pdx1P52946 Gm12266-201ENSMUST00000120311 962 ntBASIC11.65□□□□□ -0.54
Pdx1P52946 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pdx1P52946 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.65□□□□□ -0.54
Pdx1P52946 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Pdx1P52946 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pdx1P52946 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pdx1P52946 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.65□□□□□ -0.54
Pdx1P52946 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.65□□□□□ -0.54
Pdx1P52946 Gm5363-201ENSMUST00000211927 938 ntBASIC11.65□□□□□ -0.54
Pdx1P52946 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.65□□□□□ -0.54
Pdx1P52946 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.65□□□□□ -0.54
Pdx1P52946 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pdx1P52946 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdx1P52946 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.65□□□□□ -0.54
Pdx1P52946 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdx1P52946 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdx1P52946 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdx1P52946 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pdx1P52946 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Pdx1P52946 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Pdx1P52946 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.65□□□□□ -0.55
Pdx1P52946 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pdx1P52946 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pdx1P52946 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pdx1P52946 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.55
Pdx1P52946 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.64□□□□□ -0.55
Pdx1P52946 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.64□□□□□ -0.55
Pdx1P52946 Gm11700-201ENSMUST00000119409 403 ntBASIC11.64□□□□□ -0.55
Pdx1P52946 Gm8566-201ENSMUST00000120174 465 ntBASIC11.64□□□□□ -0.55
Pdx1P52946 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.64□□□□□ -0.55
Pdx1P52946 Mir6927-201ENSMUST00000184494 71 ntBASIC11.64□□□□□ -0.55
Pdx1P52946 Gm28937-201ENSMUST00000185413 695 ntBASIC11.64□□□□□ -0.55
Pdx1P52946 Gm29400-201ENSMUST00000187208 695 ntBASIC11.64□□□□□ -0.55
Pdx1P52946 Gm28662-201ENSMUST00000188446 695 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms