Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.1□□□□□ -0.47
TubP50586 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TubP50586 Gm7848-201ENSMUST00000210739 718 ntBASIC12.1□□□□□ -0.47
TubP50586 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
TubP50586 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TubP50586 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TubP50586 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TubP50586 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TubP50586 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.1□□□□□ -0.47
TubP50586 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TubP50586 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.1□□□□□ -0.47
TubP50586 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TubP50586 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TubP50586 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TubP50586 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TubP50586 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TubP50586 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TubP50586 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TubP50586 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TubP50586 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TubP50586 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TubP50586 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
TubP50586 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.09□□□□□ -0.47
TubP50586 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Gm24891-201ENSMUST00000104391 136 ntBASIC12.09□□□□□ -0.47
TubP50586 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TubP50586 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
TubP50586 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.09□□□□□ -0.47
TubP50586 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TubP50586 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.09□□□□□ -0.47
TubP50586 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.09□□□□□ -0.47
TubP50586 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.09□□□□□ -0.47
TubP50586 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.09□□□□□ -0.47
TubP50586 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.09□□□□□ -0.47
TubP50586 Gm45575-201ENSMUST00000210283 548 ntBASIC12.09□□□□□ -0.47
TubP50586 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.09□□□□□ -0.47
TubP50586 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
TubP50586 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TubP50586 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.09□□□□□ -0.47
TubP50586 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TubP50586 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
TubP50586 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TubP50586 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TubP50586 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TubP50586 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
TubP50586 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
TubP50586 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TubP50586 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TubP50586 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
TubP50586 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TubP50586 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TubP50586 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.08□□□□□ -0.48
TubP50586 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TubP50586 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TubP50586 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TubP50586 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TubP50586 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TubP50586 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TubP50586 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
TubP50586 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
TubP50586 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.08□□□□□ -0.48
TubP50586 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.08□□□□□ -0.48
TubP50586 Gm23085-201ENSMUST00000157849 293 ntBASIC12.08□□□□□ -0.48
TubP50586 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
TubP50586 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TubP50586 Mir5120-201ENSMUST00000175020 78 ntBASIC12.08□□□□□ -0.48
TubP50586 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
TubP50586 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
TubP50586 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.08□□□□□ -0.48
TubP50586 Mir7070-201ENSMUST00000183657 86 ntBASIC12.08□□□□□ -0.48
TubP50586 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TubP50586 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.08□□□□□ -0.48
TubP50586 Gm5369-201ENSMUST00000217499 588 ntBASIC12.08□□□□□ -0.48
TubP50586 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
TubP50586 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
TubP50586 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TubP50586 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.08□□□□□ -0.48
TubP50586 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TubP50586 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.08□□□□□ -0.48
TubP50586 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms