Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Shmt1P50431 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Shmt1P50431 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Shmt1P50431 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Shmt1P50431 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.46□□□□□ -0.41
Shmt1P50431 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.46□□□□□ -0.41
Shmt1P50431 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.46□□□□□ -0.41
Shmt1P50431 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Shmt1P50431 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.46□□□□□ -0.41
Shmt1P50431 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Shmt1P50431 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Gm15566-201ENSMUST00000121130 590 ntBASIC12.46□□□□□ -0.41
Shmt1P50431 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Gm11960-201ENSMUST00000122068 925 ntBASIC12.46□□□□□ -0.41
Shmt1P50431 Mir6546-201ENSMUST00000184460 62 ntBASIC12.46□□□□□ -0.41
Shmt1P50431 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.46□□□□□ -0.41
Shmt1P50431 Gm7467-201ENSMUST00000185173 652 ntBASIC12.46□□□□□ -0.41
Shmt1P50431 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.46□□□□□ -0.41
Shmt1P50431 Gm10774-201ENSMUST00000188689 204 ntBASIC12.46□□□□□ -0.41
Shmt1P50431 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.46□□□□□ -0.41
Shmt1P50431 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.46□□□□□ -0.41
Shmt1P50431 Gm35960-201ENSMUST00000202712 767 ntBASIC12.46□□□□□ -0.41
Shmt1P50431 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.46□□□□□ -0.41
Shmt1P50431 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.46□□□□□ -0.41
Shmt1P50431 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.46□□□□□ -0.41
Shmt1P50431 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Shmt1P50431 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.46□□□□□ -0.41
Shmt1P50431 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.46□□□□□ -0.41
Shmt1P50431 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt1P50431 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.46□□□□□ -0.41
Shmt1P50431 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Shmt1P50431 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt1P50431 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt1P50431 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt1P50431 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
Shmt1P50431 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt1P50431 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Shmt1P50431 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt1P50431 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Shmt1P50431 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.45□□□□□ -0.42
Shmt1P50431 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Shmt1P50431 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Shmt1P50431 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.45□□□□□ -0.42
Shmt1P50431 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Gm11783-201ENSMUST00000119549 885 ntBASIC12.45□□□□□ -0.42
Shmt1P50431 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.45□□□□□ -0.42
Shmt1P50431 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.45□□□□□ -0.42
Shmt1P50431 Gm38151-201ENSMUST00000195085 289 ntBASIC12.45□□□□□ -0.42
Shmt1P50431 Gm5982-201ENSMUST00000196234 512 ntBASIC12.45□□□□□ -0.42
Shmt1P50431 Mir7686-201ENSMUST00000200604 57 ntBASIC12.45□□□□□ -0.42
Shmt1P50431 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.45□□□□□ -0.42
Shmt1P50431 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.45□□□□□ -0.42
Shmt1P50431 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.45□□□□□ -0.42
Shmt1P50431 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shmt1P50431 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Shmt1P50431 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms