Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.98□□□□□ -0.49
Vps4bP46467 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.98□□□□□ -0.49
Vps4bP46467 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.98□□□□□ -0.49
Vps4bP46467 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.98□□□□□ -0.49
Vps4bP46467 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.98□□□□□ -0.49
Vps4bP46467 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps4bP46467 Gm11930-201ENSMUST00000117788 190 ntBASIC11.98□□□□□ -0.49
Vps4bP46467 Gm11511-201ENSMUST00000118146 540 ntBASIC11.98□□□□□ -0.49
Vps4bP46467 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps4bP46467 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.98□□□□□ -0.49
Vps4bP46467 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps4bP46467 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.98□□□□□ -0.49
Vps4bP46467 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.98□□□□□ -0.49
Vps4bP46467 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps4bP46467 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps4bP46467 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps4bP46467 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps4bP46467 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vps4bP46467 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Vps4bP46467 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Vps4bP46467 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.98□□□□□ -0.49
Vps4bP46467 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps4bP46467 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.98□□□□□ -0.49
Vps4bP46467 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vps4bP46467 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vps4bP46467 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps4bP46467 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps4bP46467 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps4bP46467 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.98□□□□□ -0.49
Vps4bP46467 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps4bP46467 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Vps4bP46467 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.97□□□□□ -0.49
Vps4bP46467 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.97□□□□□ -0.49
Vps4bP46467 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Vps4bP46467 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.97□□□□□ -0.49
Vps4bP46467 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vps4bP46467 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Vps4bP46467 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Vps4bP46467 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.97□□□□□ -0.49
Vps4bP46467 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.97□□□□□ -0.49
Vps4bP46467 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vps4bP46467 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.97□□□□□ -0.49
Vps4bP46467 Gm6621-201ENSMUST00000193251 772 ntBASIC11.97□□□□□ -0.49
Vps4bP46467 Gm19287-201ENSMUST00000203190 358 ntBASIC11.97□□□□□ -0.49
Vps4bP46467 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Vps4bP46467 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vps4bP46467 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Vps4bP46467 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Vps4bP46467 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.97□□□□□ -0.49
Vps4bP46467 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.97□□□□□ -0.49
Vps4bP46467 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Vps4bP46467 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vps4bP46467 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.97□□□□□ -0.49
Vps4bP46467 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vps4bP46467 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vps4bP46467 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Vps4bP46467 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Vps4bP46467 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Vps4bP46467 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Vps4bP46467 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.96□□□□□ -0.49
Vps4bP46467 Gm22323-201ENSMUST00000103832 109 ntBASIC11.96□□□□□ -0.49
Vps4bP46467 Gm23270-201ENSMUST00000104055 131 ntBASIC11.96□□□□□ -0.49
Vps4bP46467 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms