Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sox18P43680 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sox18P43680 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.55□□□□□ -0.56
Sox18P43680 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sox18P43680 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.55□□□□□ -0.56
Sox18P43680 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.55□□□□□ -0.56
Sox18P43680 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.55□□□□□ -0.56
Sox18P43680 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Gm45832-201ENSMUST00000212762 1443 ntBASIC11.55□□□□□ -0.56
Sox18P43680 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.55□□□□□ -0.56
Sox18P43680 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Sox18P43680 Gm12218-201ENSMUST00000117666 399 ntBASIC11.55□□□□□ -0.56
Sox18P43680 Gm11663-201ENSMUST00000117888 290 ntBASIC11.55□□□□□ -0.56
Sox18P43680 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.55□□□□□ -0.56
Sox18P43680 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sox18P43680 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sox18P43680 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC11.55□□□□□ -0.56
Sox18P43680 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sox18P43680 Gm28686-201ENSMUST00000187404 609 ntBASIC11.55□□□□□ -0.56
Sox18P43680 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC11.55□□□□□ -0.56
Sox18P43680 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.55□□□□□ -0.56
Sox18P43680 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.55□□□□□ -0.56
Sox18P43680 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.55□□□□□ -0.56
Sox18P43680 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.55□□□□□ -0.56
Sox18P43680 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sox18P43680 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sox18P43680 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sox18P43680 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.55□□□□□ -0.56
Sox18P43680 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Sox18P43680 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.55□□□□□ -0.56
Sox18P43680 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sox18P43680 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox18P43680 Gm26831-201ENSMUST00000181458 1380 ntBASIC11.54□□□□□ -0.56
Sox18P43680 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox18P43680 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.54□□□□□ -0.56
Sox18P43680 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Sox18P43680 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.54□□□□□ -0.56
Sox18P43680 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Sox18P43680 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Sox18P43680 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sox18P43680 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sox18P43680 Gm26286-201ENSMUST00000104166 134 ntBASIC11.54□□□□□ -0.56
Sox18P43680 Gm25063-201ENSMUST00000104666 94 ntBASIC11.54□□□□□ -0.56
Sox18P43680 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Sox18P43680 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Gm15566-201ENSMUST00000121130 590 ntBASIC11.54□□□□□ -0.56
Sox18P43680 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC11.54□□□□□ -0.56
Sox18P43680 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sox18P43680 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Sox18P43680 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.54□□□□□ -0.56
Sox18P43680 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.54□□□□□ -0.56
Sox18P43680 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC11.54□□□□□ -0.56
Sox18P43680 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Sox18P43680 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.54□□□□□ -0.56
Sox18P43680 Gm37809-201ENSMUST00000195050 931 ntBASIC11.54□□□□□ -0.56
Sox18P43680 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sox18P43680 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.54□□□□□ -0.56
Sox18P43680 Gm18059-201ENSMUST00000208073 580 ntBASIC11.54□□□□□ -0.56
Sox18P43680 Gm45594-201ENSMUST00000211717 241 ntBASIC11.54□□□□□ -0.56
Sox18P43680 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox18P43680 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.54□□□□□ -0.56
Sox18P43680 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.54□□□□□ -0.56
Sox18P43680 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.54□□□□□ -0.56
Sox18P43680 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.54□□□□□ -0.56
Sox18P43680 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms