Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
Rom1P32958 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Rom1P32958 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Rom1P32958 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Rom1P32958 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Rom1P32958 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Gm4984-201ENSMUST00000115987 360 ntBASIC9.31□□□□□ -0.92
Rom1P32958 Gm11814-201ENSMUST00000119515 929 ntBASIC9.31□□□□□ -0.92
Rom1P32958 Gm14999-201ENSMUST00000121039 624 ntBASIC9.31□□□□□ -0.92
Rom1P32958 Gm13570-201ENSMUST00000140763 309 ntBASIC9.31□□□□□ -0.92
Rom1P32958 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Gm22331-201ENSMUST00000158066 136 ntBASIC9.31□□□□□ -0.92
Rom1P32958 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Rom1P32958 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Gm37201-201ENSMUST00000191845 523 ntBASIC9.31□□□□□ -0.92
Rom1P32958 Gm38314-201ENSMUST00000195709 625 ntBASIC9.31□□□□□ -0.92
Rom1P32958 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC9.31□□□□□ -0.92
Rom1P32958 Gm6439-201ENSMUST00000199849 862 ntBASIC9.31□□□□□ -0.92
Rom1P32958 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Rom1P32958 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.31□□□□□ -0.92
Rom1P32958 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Rom1P32958 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Rom1P32958 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Rom1P32958 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.31□□□□□ -0.92
Rom1P32958 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
Rom1P32958 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Rom1P32958 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Rom1P32958 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Rom1P32958 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.3□□□□□ -0.92
Rom1P32958 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.3□□□□□ -0.92
Rom1P32958 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Rom1P32958 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Rom1P32958 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC9.3□□□□□ -0.92
Rom1P32958 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC9.3□□□□□ -0.92
Rom1P32958 Mir1894-201ENSMUST00000122802 81 ntBASIC9.3□□□□□ -0.92
Rom1P32958 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC9.3□□□□□ -0.92
Rom1P32958 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.3□□□□□ -0.92
Rom1P32958 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC9.3□□□□□ -0.92
Rom1P32958 Gm7029-201ENSMUST00000173226 450 ntBASIC9.3□□□□□ -0.92
Rom1P32958 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Rom1P32958 Gm42937-201ENSMUST00000197360 752 ntBASIC9.3□□□□□ -0.92
Rom1P32958 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC9.3□□□□□ -0.92
Rom1P32958 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Rom1P32958 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.3□□□□□ -0.92
Rom1P32958 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Gm5867-201ENSMUST00000063197 592 ntBASIC9.3□□□□□ -0.92
Rom1P32958 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rom1P32958 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms