Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Mmp3P28862 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Mmp3P28862 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Mmp3P28862 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Mmp3P28862 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Mmp3P28862 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.6□□□□□ -0.39
Mmp3P28862 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Mmp3P28862 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Mmp3P28862 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Mmp3P28862 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Mmp3P28862 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp3P28862 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Mmp3P28862 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Mmp3P28862 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Mmp3P28862 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Mmp3P28862 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.59□□□□□ -0.39
Mmp3P28862 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Gm11244-201ENSMUST00000121243 237 ntBASIC12.59□□□□□ -0.39
Mmp3P28862 Mir1956-201ENSMUST00000157748 65 ntBASIC12.59□□□□□ -0.39
Mmp3P28862 Gm8194-201ENSMUST00000159783 859 ntBASIC12.59□□□□□ -0.39
Mmp3P28862 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.59□□□□□ -0.39
Mmp3P28862 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.59□□□□□ -0.39
Mmp3P28862 Gm17877-201ENSMUST00000192578 814 ntBASIC12.59□□□□□ -0.39
Mmp3P28862 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.59□□□□□ -0.39
Mmp3P28862 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Mmp3P28862 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.59□□□□□ -0.39
Mmp3P28862 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.59□□□□□ -0.39
Mmp3P28862 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.59□□□□□ -0.39
Mmp3P28862 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Mmp3P28862 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Mmp3P28862 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Mmp3P28862 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp3P28862 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Mmp3P28862 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Mmp3P28862 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Mmp3P28862 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Mmp3P28862 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Mmp3P28862 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp3P28862 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.58□□□□□ -0.4
Mmp3P28862 Gm15615-201ENSMUST00000118876 198 ntBASIC12.58□□□□□ -0.4
Mmp3P28862 Gm15782-201ENSMUST00000121073 445 ntBASIC12.58□□□□□ -0.4
Mmp3P28862 Gm13182-201ENSMUST00000122241 312 ntBASIC12.58□□□□□ -0.4
Mmp3P28862 Mir1901-201ENSMUST00000122616 78 ntBASIC12.58□□□□□ -0.4
Mmp3P28862 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.58□□□□□ -0.4
Mmp3P28862 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms