Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col2a1P28481 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col2a1P28481 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col2a1P28481 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col2a1P28481 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Col2a1P28481 Gm14270-201ENSMUST00000118388 846 ntBASIC13.22□□□□□ -0.29
Col2a1P28481 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.22□□□□□ -0.29
Col2a1P28481 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.22□□□□□ -0.29
Col2a1P28481 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.22□□□□□ -0.29
Col2a1P28481 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.22□□□□□ -0.29
Col2a1P28481 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Gm18776-201ENSMUST00000188833 654 ntBASIC13.22□□□□□ -0.29
Col2a1P28481 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Col2a1P28481 Gm7082-201ENSMUST00000209880 969 ntBASIC13.22□□□□□ -0.29
Col2a1P28481 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col2a1P28481 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.22□□□□□ -0.29
Col2a1P28481 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col2a1P28481 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col2a1P28481 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col2a1P28481 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col2a1P28481 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col2a1P28481 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col2a1P28481 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col2a1P28481 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col2a1P28481 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col2a1P28481 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col2a1P28481 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.21□□□□□ -0.29
Col2a1P28481 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col2a1P28481 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.21□□□□□ -0.29
Col2a1P28481 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.21□□□□□ -0.29
Col2a1P28481 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Col2a1P28481 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col2a1P28481 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Col2a1P28481 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.21□□□□□ -0.3
Col2a1P28481 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.21□□□□□ -0.3
Col2a1P28481 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.21□□□□□ -0.3
Col2a1P28481 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 Gm19587-201ENSMUST00000191395 545 ntBASIC13.21□□□□□ -0.3
Col2a1P28481 Gm9369-201ENSMUST00000196009 733 ntBASIC13.21□□□□□ -0.3
Col2a1P28481 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.21□□□□□ -0.3
Col2a1P28481 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Col2a1P28481 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.21□□□□□ -0.3
Col2a1P28481 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.21□□□□□ -0.3
Col2a1P28481 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Col2a1P28481 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.3
Col2a1P28481 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col2a1P28481 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col2a1P28481 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col2a1P28481 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col2a1P28481 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col2a1P28481 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col2a1P28481 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col2a1P28481 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col2a1P28481 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col2a1P28481 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Col2a1P28481 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col2a1P28481 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col2a1P28481 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.2□□□□□ -0.3
Col2a1P28481 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.2□□□□□ -0.3
Col2a1P28481 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col2a1P28481 Gm15197-201ENSMUST00000120526 478 ntBASIC13.2□□□□□ -0.3
Col2a1P28481 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col2a1P28481 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col2a1P28481 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col2a1P28481 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col2a1P28481 Gm9081-201ENSMUST00000182346 991 ntBASIC13.2□□□□□ -0.3
Col2a1P28481 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms