Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.16□□□□□ -0.46
Nfkb1P25799 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.16□□□□□ -0.46
Nfkb1P25799 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.16□□□□□ -0.46
Nfkb1P25799 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.15□□□□□ -0.46
Nfkb1P25799 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.15□□□□□ -0.46
Nfkb1P25799 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.15□□□□□ -0.46
Nfkb1P25799 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nfkb1P25799 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nfkb1P25799 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.15□□□□□ -0.46
Nfkb1P25799 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nfkb1P25799 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Nfkb1P25799 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.15□□□□□ -0.46
Nfkb1P25799 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nfkb1P25799 Gm7666-201ENSMUST00000146631 819 ntBASIC12.15□□□□□ -0.46
Nfkb1P25799 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.15□□□□□ -0.46
Nfkb1P25799 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nfkb1P25799 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.15□□□□□ -0.46
Nfkb1P25799 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nfkb1P25799 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nfkb1P25799 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.15□□□□□ -0.46
Nfkb1P25799 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nfkb1P25799 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
Nfkb1P25799 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Nfkb1P25799 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nfkb1P25799 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nfkb1P25799 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nfkb1P25799 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.14□□□□□ -0.47
Nfkb1P25799 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nfkb1P25799 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.14□□□□□ -0.47
Nfkb1P25799 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nfkb1P25799 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Nfkb1P25799 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Nfkb1P25799 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.14□□□□□ -0.47
Nfkb1P25799 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Mir7032-201ENSMUST00000185154 79 ntBASIC12.14□□□□□ -0.47
Nfkb1P25799 Gm29499-201ENSMUST00000189151 486 ntBASIC12.14□□□□□ -0.47
Nfkb1P25799 Gm28329-201ENSMUST00000191208 689 ntBASIC12.14□□□□□ -0.47
Nfkb1P25799 Gm29171-201ENSMUST00000191397 486 ntBASIC12.14□□□□□ -0.47
Nfkb1P25799 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.14□□□□□ -0.47
Nfkb1P25799 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.14□□□□□ -0.47
Nfkb1P25799 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.14□□□□□ -0.47
Nfkb1P25799 Gm17831-201ENSMUST00000205579 900 ntBASIC12.14□□□□□ -0.47
Nfkb1P25799 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.14□□□□□ -0.47
Nfkb1P25799 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.14□□□□□ -0.47
Nfkb1P25799 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.14□□□□□ -0.47
Nfkb1P25799 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.14□□□□□ -0.47
Nfkb1P25799 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nfkb1P25799 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms