Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd48P18181 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cd48P18181 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.59□□□□□ -0.71
Cd48P18181 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Cd48P18181 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cd48P18181 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.59□□□□□ -0.71
Cd48P18181 Gm11793-201ENSMUST00000120433 981 ntBASIC10.59□□□□□ -0.71
Cd48P18181 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.59□□□□□ -0.71
Cd48P18181 Gm24845-201ENSMUST00000158034 109 ntBASIC10.59□□□□□ -0.71
Cd48P18181 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Cd48P18181 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cd48P18181 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Gm29396-201ENSMUST00000185659 716 ntBASIC10.59□□□□□ -0.71
Cd48P18181 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.59□□□□□ -0.71
Cd48P18181 Gm38158-201ENSMUST00000194617 339 ntBASIC10.59□□□□□ -0.71
Cd48P18181 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.59□□□□□ -0.71
Cd48P18181 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.59□□□□□ -0.71
Cd48P18181 Gm6013-201ENSMUST00000212264 699 ntBASIC10.59□□□□□ -0.71
Cd48P18181 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cd48P18181 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.59□□□□□ -0.71
Cd48P18181 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cd48P18181 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cd48P18181 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd48P18181 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Cd48P18181 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.58□□□□□ -0.72
Cd48P18181 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cd48P18181 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cd48P18181 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cd48P18181 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.58□□□□□ -0.72
Cd48P18181 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.58□□□□□ -0.72
Cd48P18181 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Gm11531-201ENSMUST00000117614 555 ntBASIC10.58□□□□□ -0.72
Cd48P18181 Gm13297-201ENSMUST00000120205 934 ntBASIC10.58□□□□□ -0.72
Cd48P18181 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.58□□□□□ -0.72
Cd48P18181 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.58□□□□□ -0.72
Cd48P18181 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.58□□□□□ -0.72
Cd48P18181 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.58□□□□□ -0.72
Cd48P18181 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cd48P18181 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cd48P18181 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cd48P18181 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Cd48P18181 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cd48P18181 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cd48P18181 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd48P18181 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.58□□□□□ -0.72
Cd48P18181 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.57□□□□□ -0.72
Cd48P18181 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd48P18181 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd48P18181 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd48P18181 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd48P18181 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd48P18181 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd48P18181 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cd48P18181 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms