Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
Cdx1P18111 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.57□□□□□ -0.88
Cdx1P18111 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.57□□□□□ -0.88
Cdx1P18111 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.57□□□□□ -0.88
Cdx1P18111 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC9.57□□□□□ -0.88
Cdx1P18111 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.57□□□□□ -0.88
Cdx1P18111 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Gm7783-201ENSMUST00000204795 781 ntBASIC9.57□□□□□ -0.88
Cdx1P18111 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.57□□□□□ -0.88
Cdx1P18111 Gm18935-201ENSMUST00000212692 664 ntBASIC9.57□□□□□ -0.88
Cdx1P18111 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC9.57□□□□□ -0.88
Cdx1P18111 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC9.57□□□□□ -0.88
Cdx1P18111 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Gm10146-201ENSMUST00000072739 309 ntBASIC9.57□□□□□ -0.88
Cdx1P18111 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.57□□□□□ -0.88
Cdx1P18111 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Cdx1P18111 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Cdx1P18111 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Cdx1P18111 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Gm10040-201ENSMUST00000080726 1662 ntBASIC9.57□□□□□ -0.88
Cdx1P18111 Gm13437-201ENSMUST00000122434 1981 ntBASIC9.57□□□□□ -0.88
Cdx1P18111 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.57□□□□□ -0.88
Cdx1P18111 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.57□□□□□ -0.88
Cdx1P18111 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.57□□□□□ -0.88
Cdx1P18111 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Cdx1P18111 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
Cdx1P18111 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Abhd6-203ENSMUST00000225234 1958 ntBASIC9.56□□□□□ -0.88
Cdx1P18111 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC9.56□□□□□ -0.88
Cdx1P18111 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.56□□□□□ -0.88
Cdx1P18111 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cdx1P18111 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC9.56□□□□□ -0.88
Cdx1P18111 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Gm11793-201ENSMUST00000120433 981 ntBASIC9.56□□□□□ -0.88
Cdx1P18111 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC9.56□□□□□ -0.88
Cdx1P18111 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC9.56□□□□□ -0.88
Cdx1P18111 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Mir8109-201ENSMUST00000184375 117 ntBASIC9.56□□□□□ -0.88
Cdx1P18111 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.56□□□□□ -0.88
Cdx1P18111 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC9.56□□□□□ -0.88
Cdx1P18111 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Cdx1P18111 Gm9368-201ENSMUST00000219348 831 ntBASIC9.56□□□□□ -0.88
Cdx1P18111 Gm4935-201ENSMUST00000221316 1198 ntBASIC9.56□□□□□ -0.88
Cdx1P18111 AC154462.2-201ENSMUST00000227519 370 ntBASIC9.56□□□□□ -0.88
Cdx1P18111 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Cdx1P18111 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cdx1P18111 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.56□□□□□ -0.88
Cdx1P18111 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cdx1P18111 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms