Protein–RNA interactions for Protein: P14097

Ccl4, C-C motif chemokine 4, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl4P14097 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl4P14097 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl4P14097 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccl4P14097 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl4P14097 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl4P14097 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl4P14097 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccl4P14097 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl4P14097 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl4P14097 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl4P14097 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl4P14097 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl4P14097 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Ccl4P14097 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.82□□□□□ -0.52
Ccl4P14097 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl4P14097 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccl4P14097 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Ccl4P14097 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccl4P14097 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccl4P14097 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Ccl4P14097 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccl4P14097 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Ccl4P14097 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccl4P14097 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccl4P14097 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.81□□□□□ -0.52
Ccl4P14097 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccl4P14097 Gm16219-201ENSMUST00000120096 274 ntBASIC11.81□□□□□ -0.52
Ccl4P14097 Gm15197-201ENSMUST00000120526 478 ntBASIC11.81□□□□□ -0.52
Ccl4P14097 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC11.81□□□□□ -0.52
Ccl4P14097 Gm23694-201ENSMUST00000179335 110 ntBASIC11.81□□□□□ -0.52
Ccl4P14097 Mir7051-201ENSMUST00000184167 73 ntBASIC11.81□□□□□ -0.52
Ccl4P14097 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Ccl4P14097 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Gm43249-201ENSMUST00000200464 458 ntBASIC11.81□□□□□ -0.52
Ccl4P14097 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.81□□□□□ -0.52
Ccl4P14097 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Gm7525-201ENSMUST00000219425 454 ntBASIC11.81□□□□□ -0.52
Ccl4P14097 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccl4P14097 AC138716.2-201ENSMUST00000226670 1016 ntBASIC11.81□□□□□ -0.52
Ccl4P14097 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccl4P14097 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccl4P14097 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccl4P14097 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.81□□□□□ -0.52
Ccl4P14097 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccl4P14097 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl4P14097 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl4P14097 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.8□□□□□ -0.52
Ccl4P14097 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl4P14097 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl4P14097 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl4P14097 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccl4P14097 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Ccl4P14097 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl4P14097 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Ccl4P14097 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl4P14097 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccl4P14097 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl4P14097 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl4P14097 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl4P14097 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl4P14097 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccl4P14097 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
Ccl4P14097 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccl4P14097 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.8□□□□□ -0.52
Ccl4P14097 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms