Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Fv4P11370 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.38□□□□□ -0.59
Fv4P11370 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Fv4P11370 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Fv4P11370 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.38□□□□□ -0.59
Fv4P11370 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Fv4P11370 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.38□□□□□ -0.59
Fv4P11370 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Fv4P11370 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.38□□□□□ -0.59
Fv4P11370 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.38□□□□□ -0.59
Fv4P11370 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Fv4P11370 Cts7-204ENSMUST00000225321 1257 ntBASIC11.38□□□□□ -0.59
Fv4P11370 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.38□□□□□ -0.59
Fv4P11370 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Fv4P11370 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Fv4P11370 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Fv4P11370 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fv4P11370 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Fv4P11370 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.37□□□□□ -0.59
Fv4P11370 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.37□□□□□ -0.59
Fv4P11370 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Fv4P11370 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Fv4P11370 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Fv4P11370 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.37□□□□□ -0.59
Fv4P11370 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.37□□□□□ -0.59
Fv4P11370 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.37□□□□□ -0.59
Fv4P11370 Gm45865-201ENSMUST00000211815 945 ntBASIC11.37□□□□□ -0.59
Fv4P11370 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.37□□□□□ -0.59
Fv4P11370 Gm2553-201ENSMUST00000215986 605 ntBASIC11.37□□□□□ -0.59
Fv4P11370 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.37□□□□□ -0.59
Fv4P11370 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Gm5705-201ENSMUST00000066241 711 ntBASIC11.37□□□□□ -0.59
Fv4P11370 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Fv4P11370 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.37□□□□□ -0.59
Fv4P11370 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Fv4P11370 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Fv4P11370 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fv4P11370 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fv4P11370 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fv4P11370 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fv4P11370 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.36□□□□□ -0.59
Fv4P11370 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Fv4P11370 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.36□□□□□ -0.59
Fv4P11370 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.36□□□□□ -0.59
Fv4P11370 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms