Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.27□□□□□ -0.77
UbbP0CG49 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.27□□□□□ -0.77
UbbP0CG49 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.27□□□□□ -0.77
UbbP0CG49 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.27□□□□□ -0.77
UbbP0CG49 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
UbbP0CG49 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.27□□□□□ -0.77
UbbP0CG49 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.27□□□□□ -0.77
UbbP0CG49 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
UbbP0CG49 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
UbbP0CG49 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
UbbP0CG49 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC10.27□□□□□ -0.77
UbbP0CG49 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
UbbP0CG49 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.27□□□□□ -0.77
UbbP0CG49 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
UbbP0CG49 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
UbbP0CG49 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
UbbP0CG49 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.26□□□□□ -0.77
UbbP0CG49 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.26□□□□□ -0.77
UbbP0CG49 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
UbbP0CG49 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.26□□□□□ -0.77
UbbP0CG49 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Gm11439-201ENSMUST00000118598 409 ntBASIC10.26□□□□□ -0.77
UbbP0CG49 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.26□□□□□ -0.77
UbbP0CG49 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Gm25261-201ENSMUST00000157416 134 ntBASIC10.26□□□□□ -0.77
UbbP0CG49 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.26□□□□□ -0.77
UbbP0CG49 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
UbbP0CG49 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.26□□□□□ -0.77
UbbP0CG49 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.26□□□□□ -0.77
UbbP0CG49 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.26□□□□□ -0.77
UbbP0CG49 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.26□□□□□ -0.77
UbbP0CG49 Gm9996-201ENSMUST00000070359 913 ntBASIC10.26□□□□□ -0.77
UbbP0CG49 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
UbbP0CG49 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
UbbP0CG49 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.26□□□□□ -0.77
UbbP0CG49 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.26□□□□□ -0.77
UbbP0CG49 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
UbbP0CG49 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.26□□□□□ -0.77
UbbP0CG49 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UbbP0CG49 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.26□□□□□ -0.77
UbbP0CG49 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
UbbP0CG49 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
UbbP0CG49 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UbbP0CG49 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UbbP0CG49 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UbbP0CG49 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
UbbP0CG49 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
UbbP0CG49 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UbbP0CG49 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
UbbP0CG49 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UbbP0CG49 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
UbbP0CG49 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UbbP0CG49 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UbbP0CG49 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.25□□□□□ -0.77
UbbP0CG49 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.25□□□□□ -0.77
UbbP0CG49 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UbbP0CG49 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.25□□□□□ -0.77
UbbP0CG49 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
UbbP0CG49 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
UbbP0CG49 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms